Table 4.
JGI-ABC using AntiSMASH v 5.0 predicted the putative BGCs coding for antibiotics and secondary metabolites.
| AntiSMASH Cluster | Type | From bp | To bp | Most similar known gene cluster | Similarity |
|---|---|---|---|---|---|
| 1 | Nrps | 44,661 | 96,334 | Fusaricidin biosynthetic | 100% |
| 2 | Nrps | 1 | 1886 | – | |
| 3 | Transatpks-Nrps | 1 | 43,034 | – | |
| 4 | Nrps | 1 | 19,240 | – | |
| 5 | Lantipeptide | 196,869 | 223,875 | Mersacidin biosynthetic | 20 |
| 6 | Nrps | 1 | 7725 | – | |
| 7 | Nrps | 1 | 2793 | – | |
| 8 | Nrps | 1 | 8875 | – | |
| 9 | Nrps | 1 | 47,371 | Tridecaptin biosynthetic | 40 |
| 10 | Nrps | 1 | 23,231 | Tridecaptin biosynthetic | 80 |
| 11 | Other | 348,320 | 382,015 | – | |
| 12 | Nrps | 50,170 | 83,876 | – | |
| 13 | Nrps | 1 | 5339 | – | |
| 14 | Nrps | 1 | 2640 | – | |
| 15 | Nrps | 1 | 25,403 | – | |
| 16 | Nrps | 1 | 4621 | – | |
| 17 | Nrps | 1 | 34,116 | – | |
| 18 | Lassopeptide | 91,874 | 115,990 | – | |
| 19 | Transatpks-Nrps | 151,159 | 251,144 | – | |
| 20 | Bacteriocin | 291,553 | 301,789 | – | |
| 21 | Transatpks | 1 | 55,964 | Bacillaene biosynthetic | 28 |
| 22 | Transatpks | 1 | 8497 | Misakinolide biosynthetic | 12 |
| 23 | Transatpks-Others-Nrps | 1 | 34,957 | Nosperin biosynthetic | 46 |
| 24 | Nrps | 1 | 14,018 | Polymyxin biosynthetic | 100 |
| 25 | Phosphonate | 165,862 | 206,761 | – |
The clusters include NRPS cluster such as transatpks, bacillaene, misakinolide, and nosperin biosynthetic; other unspecified ribosomally synthesized and post-translationally modified peptide product (RiPP) cluster; Transatpks-NRPS, and Lassopeptide cluster. (AntiSMASH cluster numbers, region, similarity % and similar known cluster are shown, – indicates which do not have similar cluster in the database).