Table 2.
Genes encoded in the cp genomes of A. villosum, A. longipetiolatum and A. maximum
| Category of genes | Group of genes |
|---|---|
| photosystem I | psaA, psaB, psaC, psaI, psaJ |
| photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, |
| psbK, psbL, psbM, psbN, psbT, psbZ, ycf3** | |
| cytochrome b/f complex | petA, petBa, petD, petG, petL, petN |
| ATP synthase | atpA, atpB, atpE, atpF*, atpH, atpI |
| NADH-dehydrogenase | ndhA*, ndhB (×2)*, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| rubisco | rbcL |
|
DNA dependent RNA polymerase |
rpoA, rpoB, rpoC1*, rpoC2 |
| Small subunit of ribosome | rps2, rps3, rps4, rps7 (×2), rps8, rps11, rps12 (× 2), |
| rps14, rps15, rps16*, rps18, rps19 (×2), | |
| rpl2 (×2)*, rpl14, rpl16b, rpl20, rpl22, rpl23 (× 2), rpl32, rpl33, rpl36 | |
| Conserved open reading frames | ycf1c (×2), ycf2 (× 2), ycf4 |
| Ribosomal RNAs | rrn5 (×2), rrn16 (× 2), rrn23 (× 2) |
| Transfer RNAs |
trnA-UGC (×2)*, trnC-GCA*, trnD-GUC, trnE-UUC (×3)*, trnF-GAA, trnG-GCC, trnH-GUG (× 2), trnK-UUU*, trnL-CAA (× 2), trnL-UAA*, |
| trnL-UAG, trnM-CAU (×4), trnN-GUU (×2), trnP-UGG, trnQ-UUG, | |
|
trnR-ACG(×2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-CGA*, trnS-UGA, trnT-UGU, trnT-GGU, trnV-GAC (× 2), trnW-CCA, trnY-GUA | |
| Other genes | accD*, ccsA, cemA, clpP **, infA, matK |
(×2) indicates the gene sequence is repeated twice. * indicates genes containing one intron; while ** indicates gene containing two introns. a, b and c was contained an intron in A. villosum, A. longipetiolatum and A. maximum respectively