Table II.
Backbone models constructed using true positions of secondary structure traces.
| Index | ID/EMDa | #AAb | HlxSeqc | StrSeqd | HlxMape | StrMapf | RMSDg |
|---|---|---|---|---|---|---|---|
| 1 | 1A7D | 118 | 6 | 0 | 4 | 0 | 4.80 |
| 2 | 1BZ4 | 144 | 5 | 0 | 5 | 0 | 4.30 |
| 3 | 4V68_BR/5030 | 117 | 4 | 3 | 4 | 3 | 4.04 |
| 4 | 1HZ4 | 373 | 21 | 0 | 19 | 0 | 3.19 |
| 5 | 3LTJ | 201 | 16 | 0 | 12 | 0 | 3.32 |
| 6 | 4OXW | 119 | 5 | 3 | 3 | 3 | 4.21 |
| 7 | 1YD0 | 96 | 5 | 4 | 3 | 3 | 4.01 |
| 8 | 1OZ9 | 150 | 5 | 5 | 5 | 4 | 3.61 |
| 9 | 1ICX | 155 | 6 | 7 | 3 | 7 | 3.47 |
| 10 | 2Y4Z | 140 | 6 | 2 | 6 | 2 | 4.10 |
| Average | 3.91 | ||||||
a
The protein ID of PDB/experimental image EMD ID.
b
The number of amino acids in the protein.
c
The number of helices in the native structure.
d
The number of strands in the native structure
e
The number of helices detected from the 3D image.
f
The number of strands detected from the 3D image.
g
The backbone RMSD100 (Å) of the constructed model with the native structure.