Table III.

Full models constructed using constrained CCD, FBCCD, and simulated annealing.

Index	IDa	#AAb	#hlxc	#α-Trcd	Topology Ranke	Rankf	RMSD100g
1	2PSR	100	5	4	31	21	5.45
2	1A7D	118	6	4	1	6	3.87
3	1NG6	148	9	7	2	33	3.63
4	2XB5	207	13	9	11	10	3.49
5	3ACW	293	17	14	32	43	3.29
6	1Z1L	345	23	14	11	114	3.51
7	3HJL	329	20	20	1	37	2.99
8	1HZ4	373	21	19	2	2	3.87
Average RMSD100							3.76

^aThe PDB ID.

^bThe number of amino acids in the protein.

^cThe number of helices in the native structure.

^dThe number of detected helices from the 3D image.

^eThe rank of the true topology using DP-TOSS.

^fThe highest rank of the model with the correct topology evaluated using the multi-well energy function.

^gThe RMSD100 (Å) of backbone atoms for the best ranked model (with the true topology) based on potential energy.