Skip to main content
. 2022 Nov 9;5:1203. doi: 10.1038/s42003-022-04092-3

Table 1.

Top SNPs from genome-wide significant loci.

GWAS1 GWAS2 CE Italy Spain Sweden UK Meta-analysis
SNP Chromosome risk/other allele Info Score1 RR (95% CI) RR (95% CI) RR (95% CI) RR (95% CI) RR 95% CI RR 95% CI RR 95% CI RR 95% CI p value Corrected p value2
rs1924557 1:82047934 T/C 0.93 1.75 (0.68−4.47) 3.61 (1.37−9.49) 3.76 (2.16−6.53) 2.03 (0.98−4.19) 3.51 (1.33−9.26) 1.23 (0.68−2.22) 5.00 (1.59−15.7) 2.35 (1.82−3.03) 6.65 × 10−11 2.67 × 1010
rs4745 1:155106227 T/A 0.96 1.19 (0.72−1.98) 1.40 (0.91−2.16) 1.47 (1.16−1.87) 1.80 (1.16−2.78) 1.17 (0.73−1.86) 1.63 (1.13−2.36) 1.16 (0.77−1.74) 1.50 (1.32−1.71) 4.44 × 10−10 1.58 × 10−9
rs80215221 3:137550420 G/A 0.99 2.29 (1.29−4.09) 1.95 (1.20−3.17) 1.39 (1.08−1.79) 1.89 (1.24−2.89) 2.82(1.76−4.52) 1.70 (1.16−2.51) 1.99 (1.31−3.03) 1.68 (1.47−1.92) 2.26 × 10−14 1.49 × 10−13
rs6874700 5:50701750 A/T 0.99 2.54 (1.49−4.33) 1.33 (0.87−2.02) 1.60 (1.28−2.01) 1.98 (1.33−2.95) 2.14 (1.33−3.45) 1.94 (1.32−2.83) 1.84 (1.20−2.80) 1.91 (1.68−2.16) 5.58 × 10−24 1.48 × 1022
11:119964758:G:C 11:119964758 G/C 0.98 1.38 (0.81−2.36) 1.54 (0.98−2.42) 1.32 (1.03−1.69) 1.35 (0.90−2.04) 1.14(0.72−1.80) 1.68 (1.12−2.52) 2.13 (1.40−3.24) 1.47 (1.29−1.68) 8.89 × 10−9 2.63 × 108
rs10862001 12:80002106 A/G 0.83 2.02 (1.12−3.64) 1.48 (0.89−2.47) 1.77 (1.27−2.45) 1.97 (1.22−3.18) 1.03 (0.55−1.93) 2.11 (1.26−3.54) 0.83 (0.40−1.69) 1.68 (1.43−1.99) 6.84 × 10−10 2.37 × 109
rs10853087 17:45006112 C/G 0.97 1.18 (0.72−1.93) 1.44 (0.94−2.21) 1.63 (1.29−2.06) 1.60 (1.08−2.38) 1.46 (0.93−2.29) 1.26 (0.87−1.83) 1.53 (1.01−2.31) 1.47 (1.30−1.66) 1.41 × 10−9 4.67 × 109
20:55165923:G:A 20:55165923 G/A 0.97 2.30 (1.13−4.67) 1.72 (0.95−3.12) 1.46 (1.08−1.98) 2.57 (1.39−4.76) 1.00 (0.58−1.71) 2.08 (1.23−3.51) 1.89 (1.04−3.43) 1.65 (1.39−1.96) 7.31 × 10−9 2.19 × 108

1Mean imputation quality score (Info score)). Chromosomal positions are annotated according to Human Genome version 19 (hg19); CE Central Europe, UK United Kingdom

2p value corrected for genomic inflation λ = 1.068