Table 1.
GWAS1 | GWAS2 | CE | Italy | Spain | Sweden | UK | Meta-analysis | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | Chromosome | risk/other allele | Info Score1 | RR (95% CI) | RR (95% CI) | RR (95% CI) | RR (95% CI) | RR 95% CI | RR 95% CI | RR 95% CI | RR 95% CI | p value | Corrected p value2 |
rs1924557 | 1:82047934 | T/C | 0.93 | 1.75 (0.68−4.47) | 3.61 (1.37−9.49) | 3.76 (2.16−6.53) | 2.03 (0.98−4.19) | 3.51 (1.33−9.26) | 1.23 (0.68−2.22) | 5.00 (1.59−15.7) | 2.35 (1.82−3.03) | 6.65 × 10−11 | 2.67 × 10−10 |
rs4745 | 1:155106227 | T/A | 0.96 | 1.19 (0.72−1.98) | 1.40 (0.91−2.16) | 1.47 (1.16−1.87) | 1.80 (1.16−2.78) | 1.17 (0.73−1.86) | 1.63 (1.13−2.36) | 1.16 (0.77−1.74) | 1.50 (1.32−1.71) | 4.44 × 10−10 | 1.58 × 10−9 |
rs80215221 | 3:137550420 | G/A | 0.99 | 2.29 (1.29−4.09) | 1.95 (1.20−3.17) | 1.39 (1.08−1.79) | 1.89 (1.24−2.89) | 2.82(1.76−4.52) | 1.70 (1.16−2.51) | 1.99 (1.31−3.03) | 1.68 (1.47−1.92) | 2.26 × 10−14 | 1.49 × 10−13 |
rs6874700 | 5:50701750 | A/T | 0.99 | 2.54 (1.49−4.33) | 1.33 (0.87−2.02) | 1.60 (1.28−2.01) | 1.98 (1.33−2.95) | 2.14 (1.33−3.45) | 1.94 (1.32−2.83) | 1.84 (1.20−2.80) | 1.91 (1.68−2.16) | 5.58 × 10−24 | 1.48 × 10−22 |
11:119964758:G:C | 11:119964758 | G/C | 0.98 | 1.38 (0.81−2.36) | 1.54 (0.98−2.42) | 1.32 (1.03−1.69) | 1.35 (0.90−2.04) | 1.14(0.72−1.80) | 1.68 (1.12−2.52) | 2.13 (1.40−3.24) | 1.47 (1.29−1.68) | 8.89 × 10−9 | 2.63 × 10−8 |
rs10862001 | 12:80002106 | A/G | 0.83 | 2.02 (1.12−3.64) | 1.48 (0.89−2.47) | 1.77 (1.27−2.45) | 1.97 (1.22−3.18) | 1.03 (0.55−1.93) | 2.11 (1.26−3.54) | 0.83 (0.40−1.69) | 1.68 (1.43−1.99) | 6.84 × 10−10 | 2.37 × 10−9 |
rs10853087 | 17:45006112 | C/G | 0.97 | 1.18 (0.72−1.93) | 1.44 (0.94−2.21) | 1.63 (1.29−2.06) | 1.60 (1.08−2.38) | 1.46 (0.93−2.29) | 1.26 (0.87−1.83) | 1.53 (1.01−2.31) | 1.47 (1.30−1.66) | 1.41 × 10−9 | 4.67 × 10−9 |
20:55165923:G:A | 20:55165923 | G/A | 0.97 | 2.30 (1.13−4.67) | 1.72 (0.95−3.12) | 1.46 (1.08−1.98) | 2.57 (1.39−4.76) | 1.00 (0.58−1.71) | 2.08 (1.23−3.51) | 1.89 (1.04−3.43) | 1.65 (1.39−1.96) | 7.31 × 10−9 | 2.19 × 10−8 |
1Mean imputation quality score (Info score)). Chromosomal positions are annotated according to Human Genome version 19 (hg19); CE Central Europe, UK United Kingdom
2p value corrected for genomic inflation λ = 1.068