Antibodies |
|
acetylated tubulin |
Cell Signaling |
#5335; RRID:AB_10544694
|
Alexa Fluor 488 |
Life Technologies |
A-11029; RRID:AB_2534088
|
Alexa Fluor 488 |
Life Technologies |
A-11008; RRID:AB_143165
|
Alexa Fluor 568 |
Life Technologies |
A-11004; RRID:AB_2534072
|
Alexa Fluor 568 |
Life Technologies |
A-11011; RRID:AB_143157
|
Alexa Fluor 633 |
Life Technologies |
A-21052; RRID:AB_2535719
|
Alexa Fluor 633 |
Life Technologies |
A-21070; RRID:AB_2535731
|
Alexa Fluor 633 Phalloidin |
Life Technologies |
A22284 |
alpha-tub |
ThermoFisher |
MA1-80017; RRID:AB_2210201
|
anti-rabbit HRP |
Fisher |
#PI31466 |
API |
SIGMA |
D9542 |
ATP1A1 |
Cell Signaling |
#3010; RRID:AB_2060983
|
Beta-Actin |
Abcam |
ab8226; RRID:AB_306371
|
BRSK2 |
Cell Signaling |
5460S |
CALB1 |
Novus |
NBP2-50028 |
FAK |
CST |
71433S; RRID:AB_2799801
|
Fibronectin |
Abcam |
ab268020 |
gamma-tubulin |
ThermoFisher |
MA1-19421; RRID:AB_1075282
|
GAPDH |
Abcam |
ab8245; RRID:AB_2107448
|
Integrin alpha 6 |
Abcam |
ab235905 |
Integrin beta1 |
Abcam |
ab134179 |
Integrin alpha V |
Abcam |
ab179475; RRID:AB_2716738
|
IRDye®680 RD |
Li-Cor |
926–68070 |
IRDye®680 RD |
Li-Cor |
926–68071 |
IRDye®6800 CW |
Li-Cor |
926–32210 |
IRDye®6800 CW |
Li-Cor |
926–32211 |
ITGA1 |
BiCell |
10001 |
JNK |
CST |
9252S; RRID:AB_2250373
|
KDEL |
Enzo Life Sciences |
ADI-SPA-827-D |
MAP2 |
Abcam |
Ab5392; RRID:AB_2138153
|
NES |
Abcam |
Ab22035; RRID:AB_446723
|
NEUN |
Millipore |
ABN90P; RRID:AB_2341095
|
NFH |
Abcam |
Ab8135; RRID:AB_306298
|
NUP98 |
Cell Signaling |
#2598; RRID:AB_2267700
|
p-FAK (Tyr397) |
ThermoFisher |
44–625G; RRID:AB_2533702
|
p-JNK (Tyr183/185) |
CST |
4668S; RRID:AB_823588
|
p-JUN (Ser 73) |
CST |
3270S; RRID:AB_2895041
|
p-Paxillin (Tyr118) |
CST |
69363S; RRID:AB_2174466
|
Paxillin |
CST |
12065S; RRID:AB_2797814
|
PRKCG |
Santa-Cruz |
sc-211; RRID:AB_632234
|
PRPH |
Abcam |
Ab4666; RRID:AB_449340
|
PTEN |
Santa-Cruz |
sc-7974; RRID:AB_628187
|
Sacsin |
Abcam |
ab181190 |
Sacsin |
Abcam |
Cab80195; RRID:AB_10714400
|
SYN1 |
Abcam |
Ab8; RRID:AB_2200097
|
TAU p262 |
ThermoFisher |
44-750-G; RRID:AB_2533743
|
tau S199 |
Abcam |
Ab81268; RRID:AB_1641106
|
TAU5 |
Abcam |
Ab80579; RRID:AB_1603723
|
Vimentin |
Abcam |
ab8978; RRID:AB_306907
|
Vimentin |
Abcam |
ab16700; RRID:AB_443435
|
Vinculin |
ThermoFisher |
MA5-11690; RRID:AB_10976821
|
|
Chemicals, peptides, and recombinant proteins
|
|
Nocodazole |
Sigma |
#SML1665 |
all-trans retinoic acid |
Sigma |
#R2625 |
Brain-Derived Neurotrophic Factor |
Sigma |
#B3795 |
dibutyryl cyclic AMP |
Santa Cruz |
sc-201567A |
MitoTracker Green FM |
Invitrogen |
#M7514 |
|
Critical commercial assays |
|
Tau Aggregation Kit |
Cisbio |
6FTAUPEG |
Minute Plasma Membrane Protein Isolation and Cell Fractionation Kit |
Invent |
SM-005 |
|
Deposited data |
|
PRIDE |
This paper |
PXD036906 |
SRA |
This paper |
GSE214213 |
|
Experimental models: Cell lines
|
|
SH-SY5Y |
this study |
ATCC CRL2266 |
HEK293T |
Duncan et al. 2017 |
ATCC CRL1573 |
|
Experimental models: Organisms/strains
|
|
C57BL/6-Sacstm2Bebr/J |
The Jackson Laboratory |
Strain #:033221 |
Oligonucleotides/primers |
WT SACS F: GCTGTCAGGGGGAAATCTGATAAAG |
The Jackson Laboratory |
N/A |
WT SACS R: GCAGCACCTTTAGACAAAAGATTGC |
The Jackson Laboratory |
N/A |
KO SACS F: CAACCTTGGAGAAACTGTGCCTG |
The Jackson Laboratory |
N/A |
KO SACS R: CACCGACGCCAATCACAAACAC |
The Jackson Laboratory |
N/A |
PTEN siRNA Pool |
Horizon |
5728 |
|
Recombinant DNA |
|
hCas9 |
Addgene |
#41815 |
pGFP-EB1 |
Addgene |
#17234 |
tdTomato:Vinculin |
Addgene |
#58146 |
EGFP-Vimentin-7 |
Addgene |
#56439 |
|
Software and algorithms |
|
ImageJ Fiji |
NIH |
https://imagej.net/software/fiji/downloads |
CellProfiler |
Broad |
www.cellprofiler.org |
MaxQuant |
Max Planck |
https://www.maxquant.org |
Zen Black and Zen Blue |
Zeiss |
https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html |