Table 3.
feature | Day | reference | value | coef | stderr | N | N.not.0 | pval | qval |
---|---|---|---|---|---|---|---|---|---|
g:Parasutterella | D17 | E-E | V-V | 9.27240687 | 2.23419856 | 12 | 11 | 0.00248358 | 0.00807165 |
g:Enterococcus | D17 | E-E | V-V | 10.3067935 | 0.6352411 | 12 | 11 | 5.69E-08 | 7.40E-07 |
g:Turicibacter | D17 | E-E | V-V | 11.6987047 | 0.69476585 | 12 | 11 | 4.12E-08 | 7.40E-07 |
g:Clostridium_sensu_stricto | D17 | E-E | V-V | 4.24242391 | 0.62200336 | 12 | 8 | 7.72E-05 | 0.00040167 |
g:Escherichia.Shigella | D23 & D27 | E-E | V-V | -8.9731462 | 0.29054047 | 23 | 10 | 2.37E-18 | 9.02E-17 |
g:Anaerostipes | D23 & D27 | E-E | V-V | 1.96412107 | 0.3140552 | 23 | 23 | 4.16E-06 | 5.27E-05 |
g:Turicibacter | D23 & D27 | E-E | V-V | 4.17942598 | 0.91598563 | 23 | 13 | 0.00018903 | 0.00102615 |
g:Lactobacillus | D23 & D27 | E-E | V-V | 3.46545363 | 0.86845311 | 23 | 23 | 0.00071953 | 0.00303804 |
g:Lactococcus | D23 & D27 | E-E | V-V | 1.8523318 | 0.49490185 | 23 | 23 | 0.00128263 | 0.00487401 |
g:Blautia | D23 & D27 | E-E | V-V | 1.09027262 | 0.32260018 | 23 | 23 | 0.00297788 | 0.00942994 |
g:Clostridium_XlVb | D23 & D27 | E-E | V-V | 5.56667665 | 1.74996858 | 23 | 13 | 0.0046952 | 0.01274411 |
g:Clostridium_XlVa | D23 & D27 | E-E | V-V | 0.92395754 | 0.30381128 | 23 | 23 | 0.00644792 | 0.01531381 |
g:Anaerotruncus | D23 & D27 | E-E | V-V | 1.91020351 | 0.73164798 | 23 | 14 | 0.01673041 | 0.03027407 |
g:Akkermansia | D23 & D27 | E-E | V-V | -0.3032407 | 0.13064537 | 23 | 23 | 0.03096111 | 0.05115314 |
g:Clostridium_IV | D23 & D27 | E-E | V-V | 1.79460626 | 0.85996355 | 23 | 23 | 0.04991265 | 0.07902837 |
g:Escherichia.Shigella | 32&39 | E-E | V-V | -4.655963 | 0.72013279 | 24 | 8 | 2.09E-06 | 5.43E-05 |
g:Clostridium_XlVb | 32&39 | E-E | V-V | 5.09111819 | 1.37522004 | 24 | 21 | 0.00132169 | 0.01106619 |
g:Acetanaerobacterium | 32&39 | E-E | V-V | 3.4763462 | 0.98454697 | 24 | 11 | 0.00198234 | 0.01171108 |
g:Parasutterella | 32&39 | E-E | V-V | -4.9197698 | 1.40332016 | 24 | 24 | 0.00210334 | 0.01171108 |
g:Anaerotruncus | 32&39 | E-E | V-V | 0.96974983 | 0.323788 | 24 | 22 | 0.00689998 | 0.02553765 |
g:Clostridium_sensu_stricto | 32&39 | E-E | V-V | 2.98617404 | 1.01640665 | 24 | 17 | 0.00785774 | 0.02553765 |
g:Enterococcus | 32&39 | E-E | V-V | 1.6602188 | 0.56047891 | 24 | 23 | 0.00743725 | 0.02553765 |
g:Turicibacter | 32&39 | E-E | V-V | 2.89020674 | 0.97452611 | 24 | 19 | 0.00737629 | 0.02553765 |
g:Clostridium_XVIII | 32&39 | E-E | V-V | 3.34725186 | 1.18261181 | 24 | 12 | 0.01002185 | 0.03035412 |
g:Lactobacillus | 32&39 | E-E | V-V | 3.95894107 | 1.65384916 | 24 | 24 | 0.02609186 | 0.05575199 |
g:Romboutsia | 32&39 | E-E | V-V | 4.10493915 | 1.83282689 | 24 | 20 | 0.03606114 | 0.07212227 |
Coefficients represent the magnitude and the direction of change of the taxa in the “value” groups. E-E, E2-treated mice receiving FMT from E2 mice (n=4); V-V, mice with Veh implants receiving FMT from Veh mice (n=4). q<0.1 considered significant.