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Microglia take on a spectrum of activation states in association with RML disease. A UMAP projections of all 99,756 microglial cells isolated from RML and mock infected mice. B Hierarchical clustering of all marker genes identified within each microglial sub-cluster. Marker genes were grouped using K-means clustering, and each gene cluster was functionally annotated with enriched GO terms using Enrichr. micro—microglia; cx—cortex; hp—hippocampus
