Table 1.
Specimens used in this study to assess bone density variation along with their museum ID, pre-anal fin length, depth of capture, maximum known habitat depth, date of collection, and Genbank accession numbers from previously published protein-coding sequences. For a list of studies associated with gene sequences, please refer to the methods text.
| Genus | Species | Number of specimens | Museum ID | Pre-anal fin length (mm) | Depth of capture (m) | Max depth (m) | Date collected | COI | 16S | RAG1 |
|---|---|---|---|---|---|---|---|---|---|---|
| Ingroup | ||||||||||
| Coelorinchus | aconcagua | 1 | SIO 65-675 | 40 | 274 | 450 | 1965 | |||
| Coelorinchus | caelorhincus | 1 | SIO 65-367-62A | 44 | 366 | 1250 | 1957 | KF929773 | FJ215119 | FJ215213 |
| Coelorinchus | scaphopsis | 1 | SIO 68-90 | 48 | 567 | 1158 | 1993 | HQ127672 | JX121806 | |
| Coryphaenoides | acrolepis | 1 | SIO 71-141 | 91 | 1390 | 4700 | 1975 | KF420483 | EU099505 | KX656582 |
| Coryphaenoides | anguliceps* | 2 | SIO 59-265 | 55 ; 60 | 1366 | 2400 | 1976 | MF956577 | ||
| Coryphaenoides | ariommus | 1 | SIO 72-183 | 95 | 1097 | 1860 | 1972 | |||
| Coryphaenoides | filifer | 1 | UW 41684 | 130 | 1406 | 2904 | 1996 | KX656386 | AY947842 | KX656597 |
| Coryphaenoides | leptolepis | 1 | SIO 91-152 | 85 | 4100 | 4100 | 1991 | EU148126 | KX656463 | KX656606 |
| Coryphaenoides | longifilis | 1 | UW 119661 | 65 | 1010 | 2025 | 2000 | JF952709 | AB512070 | KX656608 |
| Coryphaenoides | rupestris | 1 | SIO 74-183 | 91 | 800 | 1200 | 1974 | KU943142 | FJ215158 | FJ215260 |
| Coryphaenoides | yaquinae* | 2 | SIO 04-101 ; SIO 91-145 | 93 ; 110 | 4100 | 7012 | 2004 ; 1991 | GU440292 | KX656501 | KX656642 |
| Malacocephalus | laevis* | 2 | SIO 79-344 ; SIO 00-200 | 94 ; 109 | 229 ; 500 | 1000 | 1968 ; 1990 | KU943142 | FJ215158 | FJ215260 |
| Nezumia | japonica | 1 | SIO 77-157 | 28 | 2000 | 2000 | 1976 | |||
| Nezumia | liolepis | 1 | SIO 71-1 | 58 | 722 | 1655 | 1975 | MF956872 | KJ010551 | FJ215283 |
| Nezumia | stelgidolepis* | 2 | UW 153473 ; UW 153474 | 100 ; 110 | 534 | 909 | 2011 | MF956879 | KJ010688 | |
| Outgroup | ||||||||||
| Lampichthys | procerus | MF966948 | AB042172 | |||||||
| Merluccius | senegalensis | 1 | CAS 235494 | 75 | 212 | 800 | 2012 | GQ988403 | DQ274040 | |
| Polymixia | japonica | KF930291 | DQ532939 | JX189778 |