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. 2022 Oct;10(20):1116. doi: 10.21037/atm-22-4471

Table 2. Osteoarthritis risk genes identified by SMR integrative analysis in OA.

Gene Chr Top SNP Top SNP_Chr A1 A2 HEIDI Pa SMR P Tissue Trait
UQCC1 20 rs6579234 20 G A 2.14E−1 2.05E−6 Muscle-skeletal SR
ASAP3 1 rs6686497 1 C T 5.07E−1 1.49E−6 Muscle-skeletal HD-hip

a, HEIDI test was used to distinguish pleiotropy from the linkage. If a gene passes the HEIDI test (P>0.05), it suggests that there is a single causal variant influencing both disease risk and gene expression. Thus, expression change of this gene may have a role in disease susceptibility. SMR, summary-data-based Mendelian randomization; OA, osteoarthritis; Chr, chromosome; SNP, single-nucleotide polymorphism; HEIDI, heterogeneity in dependent instruments; HD-hip, hospital diagnosis of hip OA; SR, self-reported; OA, osteoarthritis.