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. Author manuscript; available in PMC: 2022 Nov 14.
Published in final edited form as: Nat Protoc. 2022 Jan 12;17(2):476–512. doi: 10.1038/s41596-021-00653-8
Component Amount per well (μl) Final
UltraPure water 422
Ampligase buffer, 10X 60 1X
dNTPs, 10μM each 3 50nM
Padlock probe, 100μM; see Supplementary Table 4 for oligo sequence 0.6 0.1μM
BSA, molecular biology grade, 20 mg/mL 6 0.2 mg/mL
RNase H, 5 units/μL 48 0.4 units/μL
TaqIT DNA polymerase, 50 units/μL 0.24 0.02 units/μL
Ampligase, 5 units/μL 60 0.5 units/μL
Total volume 600