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. 2022 Oct 31;23(21):13247. doi: 10.3390/ijms232113247

Table 1.

Pros and cons of each circRNA preparation method for practical use.

Method Pros Cons
Chemical-based ligation • Various chemical reactions • Toxicity concerns
• Uses DNA splint
• No intronic scar • Multiple steps
• Unnatural bond
Enzyme-based ligation • No intronic scar (however, the first 2~3 nucleotides are guanosine by T7, SP6, T3 RNA polymerase) • Uses DNA or RNA splint
• Ligases from T4 bacteriophage [52] require 5′-monophosphate
• Large GOI • Multiple steps
• Ligation efficiency
Ribozyme-based ligation • Relatively simple
• Large GOI
• Intronic scar by group I intron PIE
• Larger transcript including ribozyme
• Reactions in vitro & in vivo • RNA contaminants after reaction