Table 1.
Sequence variants in the selected 949 bp promoter region including the 159 bp 5′ UTR in BFMI, B6N, AKR, and SJL. The causal SNP rs29947545 responsible for the reduction in expression in the dual-luciferase assay is shown in bold.
| Sequence Variant Number | rs ID | BFMI | B6N | AKR | SJL |
|---|---|---|---|---|---|
| 1 | rs232831355 | G | A | G | G |
| 2 | rs247169908 | G | T | G | G |
| 3 | rs578752359 | T | C | C | C |
| 4 | rs47275624 | C | A | C | C |
| 5 | rs47931207 | G | A | G | G |
| 6 | rs46590687 | T | G | T | T |
| 7 | rs47190609 | T | G | T | T |
| 8 | rs48376078 | T | G | T | T |
| 9 | rs51982785 | A | G | A | A |
| 10 | rs225736719 | A | G | A | A |
| 11 | rs247385341 | GCGAAGCTCCA | GCGAAGCTCCAGCGAAGCTCCA | GCGAAGCTCCAGCGAAGCTCCA | GCGAAGCTCCAGCGAAGCTCCA |
| 12 | rs227723138 | G | T | G | G |
| 13 | rs51089963 | C | A | C | C |
| 14 | rs29947551 | A | G | A | A |
| 15 | rs29947548 | C | G | C | C |
| 16 | rs29947545 | C | T | C | C |