Table 2.
Differentially expressed genes identified between PTC and normal adjacent tissues
| Gene name | Log FC | p.value | Adj.p.value | Gene name | Log FC | p.value | Adj.p.value |
|---|---|---|---|---|---|---|---|
| ZCCHC12 | 4.508553 | 0.001644 | 0.044631 | OCA2 | -3.22103 | 1.01E-06 | 0.000328 |
| SERPINA1 | 3.839261 | 0.001304 | 0.03987 | APOD | -3.2445 | 4.16E-05 | 0.004368 |
| CLDN16 | 3.552258 | 0.000588 | 0.024969 | KCNIP4 | -3.24741 | 4.94E-06 | 0.000967 |
| LAMB3 | 3.535066 | 0.001415 | 0.041006 | GDF10 | -3.29988 | 6.45E-08 | 5.26E-05 |
| ARHGAP36 | 3.495579 | 0.014246 | 0.149301 | AOX1 | -3.3166 | 5.01E-07 | 0.00021 |
| DCSTAMP | 3.447977 | 0.014667 | 0.151613 | DPT | -3.3601 | 7.56E-05 | 0.006644 |
| MIR221 | 3.394567 | 0.000235 | 0.013759 | EDN3 | -3.39653 | 0.000787 | 0.029563 |
| HMGA2 | 3.389395 | 9.41E-06 | 0.001589 | SEMA3D | -3.39872 | 0.000731 | 0.028226 |
| FN1 | 3.352628 | 9.35E-06 | 0.001589 | PLA2R1 | -3.40243 | 8.06E-08 | 5.92E-05 |
| GABRB2 | 3.325896 | 0.00058 | 0.024749 | TFF3 | -3.41232 | 0.000943 | 0.032978 |
| HLA-DQB2 | 3.191091 | 0.005331 | 0.08893 | ELAPOR1 | -3.4718 | 3.12E-07 | 0.000151 |
| CITED1 | 3.182578 | 0.001858 | 0.048169 | SRARP | -3.48399 | 3.55E-12 | 3.48E-08 |
| MUC21 | 3.163062 | 0.008502 | 0.113571 | AGR3 | -3.48904 | 6.08E-08 | 5.11E-05 |
| LIPH | 3.156156 | 0.00043 | 0.020113 | GPC3 | -3.49104 | 2.69E-08 | 2.92E-05 |
| FN1 | 3.150229 | 3.81E-06 | 0.000788 | DPP6 | -3.50692 | 0.000653 | 0.026401 |
| METTL7B | 3.133466 | 1.48E-07 | 8.88E-05 | OGN | -3.50747 | 1.05E-06 | 0.000328 |
| NGEF | 3.093314 | 0.00188 | 0.048405 | LIX1 | -3.52098 | 9.68E-06 | 0.001598 |
| TENM1 | 3.039968 | 0.002742 | 0.061156 | PKHD1L1 | -3.52818 | 0.000267 | 0.014787 |
| PDZK1IP1 | 3.030494 | 0.006582 | 0.099435 | KCNA1 | -3.63596 | 8.70E-11 | 3.20E-07 |
| KCNIP4 | -3.00341 | 1.05E-05 | 0.001663 | MT1H | -3.66233 | 0.000484 | 0.021988 |
| AGR3 | -3.00742 | 6.29E-10 | 1.42E-06 | ODAM | -3.66702 | 4.02E-05 | 0.004279 |
| VIT | -3.00901 | 1.85E-06 | 0.000485 | RELN | -3.6861 | 3.18E-05 | 0.00371 |
| OGN | -3.01036 | 2.50E-06 | 0.000596 | PI16 | -3.7009 | 2.89E-06 | 0.000654 |
| TCEAL2 | -3.02632 | 0.001951 | 0.049462 | CDH16 | -3.80527 | 0.000192 | 0.012179 |
| CHRDL1 | -3.0385 | 5.01E-06 | 0.000974 | ZNF804B | -3.83449 | 0.000205 | 0.012513 |
| VIT | -3.05628 | 1.36E-06 | 0.000388 | LRP1B | -3.95376 | 1.68E-06 | 0.000452 |
| PGA5 | -3.10873 | 2.96E-06 | 0.000659 | MT1H | -3.97437 | 0.000402 | 0.019347 |
| LYVE1 | -3.14714 | 3.33E-10 | 8.16E-07 | CRABP1 | -4.02482 | 5.01E-05 | 0.00501 |
| PLA2R1 | -3.18258 | 1.07E-06 | 0.000332 | MYOC | -4.04499 | 6.29E-12 | 4.62E-08 |
| RERGL | -3.18576 | 6.74E-05 | 0.006109 | ADH1B | -4.07759 | 1.07E-09 | 2.26E-06 |
| CA4 | -3.20718 | 0.001955 | 0.049512 | CCL21 | -4.2797 | 0.000141 | 0.009811 |
| LYVE1 | -3.21914 | 3.32E-12 | 3.48E-08 | SCARA5 | -4.7367 | 2.75E-07 | 0.000137 |