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. 2022 Sep 30;38(22):5012–5018. doi: 10.1093/bioinformatics/btac656

Table 3.

Wall clock time and peak memory usage for various tasks on different datasets and systems

Dataset System Compression gzip Loading (C++) Loading (rust) Decompression (C++) Decompression (rust) gunzip
Cactus Desktop 40 min/96.5 GiB 25 min 23 s/11.8 GiB 19 s/5.9 GiB 116 s/15.5 GiB 239 s/7.1 GiB 80 s
Cactus Laptop 23 s/9.4 GiB 16 s/5.9 GiB 186 s/9.7 GiB 304 s/6.5 GiB 80 s
Cactus Intel Server 19 min/111.5 GiB 39 min 37 s/11.7 GiB 35 s/5.9 GiB 125 s/14.5 GiB 193 s/6.5 GiB 361 s
Cactus ARM Server 16 min/111.0 GiB 48 min 33 s/11.7 GiB 33 s/5.9 GiB 86 s/14.5 GiB 138 s/7.1 GiB 350 s
PGGB Desktop 890 min/114.7 GiB 34 min 43 s/27.2 GiB 39 s/13.1 GiB 309 s/32.7 GiB 7226 s/14.2 GiB 121 s
PGGB Laptop 70 s/8.0 GiB 40 s/7.6 GiB 638 s/7.2 GiB 18451 s/12.5 GiB 116 s
PGGB Intel Server 1365 min/194.6 GiB 54 min 73 s/27.1 GiB 73 s/13.0 GiB 335 s/32.2 GiB 9194 s/13.5 GiB 603 s
PGGB ARM Server 1232 min/194.3 GiB 66 min 65 s/27.1 GiB 68 s/13.0 GiB 187 s/33.5 GiB 3499 s/14.7 GiB 551 s
1000GP Large 779 min/489.2 GiB 4341 min 48 s/28.1 GiB 35 s/12.3 GiB 7462 s/49.3 GiB 7677 s/18.8 GiB 48618 s