Table 2.
Nucleotide identity of four human coronaviruses.
Virus | Nucleotide identity (%) | |||||
---|---|---|---|---|---|---|
CDS | 1ab | S | E | M | N | |
Alphacoronavirus | ||||||
HCoV-NL63 | 95.8–99.8 | 95.4–99.8 | 95.4–99.8 | 95.4–100 | 95.4–100 | 95.4–100 |
(96.2) | (95.8) | (96.2) | (98.3) | (98.5) | (99.0) | |
HCoV-229E | 98.1–99.9 | 98.4–99.9 | 96.1–99.9 | 99.1–100 | 97.9–100 | 97.4–100 |
(99.7–100) | (99.7–100) | (99.8–100) | (100) | (99.4–100) | (99.4–100) | |
Betacoronavirus | ||||||
HCoV-HKU1 | 93.3–99.3 | 95.8–99.2 | 84.2–99.8 | 85.9–99.6 | 92.0–100 | 93.3–100 |
(93.5) | (96.0) | (84.1) | (85.9) | (92.1) | (93.4) | |
HCoV-OC43 | 97.3–100 | 97.5–100 | 94.4–100 | 89.7–100 | 94.8–100 | 91.1–100 |
(97.9–99.8) | (98.4–99.8) | (94.6–99.8) | (90.5–100) | (99.0–100) | (98.5–100) |
The values in parentheses indicate nucleotide identity between sequences obtained in this study.