TABLE 2.
Amino acid mutations of the SARS-CoV-2 spike protein obtained from cats and dogs in this study
| SARS-CoV-2 strain | GenBank accession no. | Location | Species | PANGO lineage | Characteristic mutation |
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69–70 deletion | Amino acid substitution in spike protein |
||||||||||||||||
| R346K | W353C | K417N | L452R | T478K | N501Y | A570D | H655Y | P681H | T716I | S982A | D1118H | ||||||
| Wuhan-Hu-1 | NC_045512 | China | Human | B | No | R | W | K | L | T | N | A | H | P | T | S | D |
| AFRIMS-COV1392-2021 | MZ888536 | Thailand | Human | B.1.1.7 | Yes | R | W | K | L | T | Y | D | H | H | I | A | H |
| AFRIMS-COV2483-2021 | MZ888555 | Thailand | Human | B.1.1.7 | Yes | R | W | K | L | T | Y | D | H | H | I | A | H |
| CU27042N | MZ396818 | Thailand | Dog | B.1.1.7 | Yes | R | W | K | L | T | Y | D | H | H | I | A | H |
| CU27081N | MZ401455 | Thailand | Cat | B.1.1.7 | Yes | R | W | K | L | T | Y | D | H | H | I | A | H |
| BKK-K1/2020 | ON966106 | Thailand | Dog | B.1 | Yes | R | W | K | L | T | N | A | H | P | T | S | D |
| PK055/2021 | ON966107 | Thailand | Cat | B.1.617.2 | No | R | W | K | R | K | N | A | H | R | T | S | D |
| BKK092/2021 | ON966108 | Thailand | Cat | B.1.1.7 | Yes | K | W | N | R | K | N | D | H | H | I | A | H |
| BKK042/2021 | ON966109 | Thailand | Cat | B.1.1.7 | Yes | R | W | K | L | K | Y | D | H | H | I | A | H |
| BKK100-08-21/2021 | ON966110 | Thailand | Cat | B.1.1 | Yes | R | C | K | L | T | Y | D | Y | H | I | A | H |
| BKK108/2021 | ON966111 | Thailand | Cat | B.1.1.7 | Yes | R | C | K | L | T | Y | D | Y | H | I | A | H |
| BKK102/2021 | ON966112 | Thailand | Cat | B.1.1 | Yes | K | C | N | L | T | Y | D | Y | H | I | A | H |
| BKK100-08-11/2021 | ON966113 | Thailand | Cat | B.1.1.7 | Yes | K | W | N | R | K | Y | D | Y | H | I | A | H |
| BKK-P1/2021 | ON965806 | Thailand | Human | B.1.1.7 | Yes | R | C | K | L | T | Y | D | Y | H | I | A | H |
| BKK-P2/2021 | ON965808 | Thailand | Human | B.1.1.7 | Yes | R | C | K | R | T | Y | D | Y | H | I | A | H |
| BKK-P3/2021 | ON965807 | Thailand | Human | B.1.1.7 | Yes | R | C | K | L | T | Y | D | Y | H | I | A | H |
| BKK-ST10/2021 | ON965809 | Thailand | Cat | B.1.1.7 | Yes | R | W | K | L | T | Y | D | H | H | I | A | H |
| BKK-ST023.1/2022 | ON966114 | Thailand | Dog | BA.2 | Yes | K | W | N | L | K | Y | A | Y | H | T | S | D |
| BKK-ST023.8/2022 | ON966115 | Thailand | Human | BA.2 | Yes | K | W | N | L | K | Y | A | Y | H | T | S | D |