Table 2.
Primers used in the RT-qPCR experiment.
Bacterial strain | Protein (gene) | Primers | References |
---|---|---|---|
Str. mitis | Biofilm-associated protein (bapA1) | F: 5′-ACG GCA GAT CCA GAT TCA AC-3′ R: 5′-CAG TGC TCA AGC TAC CGTC A-3’ |
Khan et al. (2016) |
Glycosyltransferase B (gtfB) | F: 5′-AAA ATG GCA CCC ACT TTC TG-3′ R: 5′-TTC TCT CAT CCG TTC TGG CT-3’ |
||
16S Ribosomal RNA (16S rRNA) | F: 5′-CRC CTG GGG AGT RCR G-3′ R: 5′-AGG GTT GCG CTC GTT G-3’ |
||
En. faecalis | Gelatinase (gelE) | F: 5′-GGG GCA ATA CAG GGA AAA AT-3′ R: 5′-TCC TTC CCC AGT TTC CTT TT-3’ |
Lee and Tan (2015) |
Cytolysin activator (cylA) | F: 5′-GAC TCG GGG ATT GAT AGG C-3′ R: 5′-TTT CCA TCT GTC CCA TCC AT-3’ |
||
Serine protease (sprE) | F: 5′-GCG TCA ATC GGA AGA ATC AT-3′ R: 5′-CAT CTT TGG CAT TCG GAT TT-3’ |
||
Collagen adhesin of Enteroccocus (aceE) | F: 5′-GGA ATG ACC GAG AAC GAT GGC T-3′ R: 5′-ATT CGG TTG CGA ACT ATT GG-3’ |
||
16S ribosomal RNA (16S rRNA) | F: 5’-CCG AGT GCT TGC ACT CAA TTG G − 3′ R: 5’-CCT TGG TGA GCC GTT ACC T-3’ |
||
Lb. paracasei | Pyruvate oxidase (spxB) | F: 5′-GTG CCG ACG TTA TTT CTT G-3′ R: 5′-ATC ACA ACA ATC GCA GCT C-3’ |
Reis et al. (2021) |
Pilin protein (spaC) | F: 5′-GGT CAG GGA GAA GCG TAC T-3′ R: 5′-CGG TGT GAC GAC TTA CCA T-3’ |
||
16S ribosomal RNA (16S rRNA) | F: 5′-GTG CTT GCA CCG AGA TTC AAC ATG-3′ R: 5′-TGC GGT TCT TGG ATC TAT GCG-3’ |