Table 2. Primer and hybridization probe sequences used in the triplex PCR.
Name‡ | Primer and probe sequences | Concentration (nM) |
---|---|---|
OvOo ND5 FW | 5’- GCTATTGGTAGGGGTTTGCAT-3’ | 300 |
OvOo ND5 Rev | 5’- CCACGATAATCCTGTTGACCA -3’ | 300 |
16S FW | 5’- AATTACTCCGGAGTTAACAGG -3’ | 500 |
16S Rev | 5’- TCTGTCTCACGACGAACTAAAC -3’ | 500 |
Ov probe | TQP 5’ 6-Fam TAAGAGGTTATTGTTTATGCAGATGG 3’ BHQ-1 | 50 |
Oo probe* | TQP 5’ Hex TAAGAGATTGTTGTTTATGCAGATAGG 3’ BHQ-1 | 50 |
16S probe | TQP 5’ Cy5 TACAACATCGATGTAGCGCAGC 3’BBQ-650 | 75 |
‡ Ov = Onchocerca volvulus, Oo = Onchocerca ochengi.