Table 1.
Name | Sequence (5′–3′) | |
---|---|---|
SARS-CoV-2 orf1ab gene (aOP102293.1) | ||
LAMP primer set [24] | F3 | CGGTGGACAAATTGTCAC |
B3 | CTTCTCTGGATTTAACACACTT | |
FIP | TCAGCACACAAAGCCAAAAATTTATTTTTCTGTGCAAAGGAAATTAAGGAG | |
BIP | TATTGGTGGAGCTAAACTTAAAGCCTTTTCTGTACAATCCCTTTGAGTG | |
LF | TTACAAGCTTAAAGAATGTCTGAACACT | |
LB | TTGAATTTAGGTGAAACATTTGTCACG | |
PCR primer set | F | TCACTAGGTTTCAAACTTTACTT |
R | AGCTGTCCAACCTGAAG | |
77-nucleotide DNA fragment | TCACTAGGTTTCAAACTTTACTTGCTTTACATAGAAGTTATTTGACTCCTGGTGATTCTTCTTCAGGTTGGACAGCT | |
S. aureus nuc gene (aDQ399678.1) | ||
LAMP primer set [25] | F3 | ATGCAAAGAAAATTGAAGTCGA |
B3 | GCGTTGTCTTCGCTCCAAAT | |
FIP | CGTTTACCATTTTTCCATCAGCATAGTTTGACAAAGGTCAAAGAACT | |
BIP | TCAAGGCTTGGCTAAAGTTGCTTATTTTCGCTTGTGCTTCACTT | |
LF | TACGCTAAGCCACGTCCATA | |
LB | CCTAACAATACACATGAACAAC | |
PCR primer set | F | GTGCTGGCATATGTATGGC |
R | CACTAAGCAACTAGTAGCG | |
E. coli O157:H7 stx1 gene (aLC388498.1) | ||
LAMP primer set [26] | F3 | TGTTGGAAGAATTTCTTTTGGA |
B3 | GCTAATAGCCCTGCGTATC | |
FIP | CGCGATGCATGATGATGACAATAGTGTTAATGCAATTCTGGGT | |
BIP | GAGCTTCCTTCTATGTGCCCGCAGAGTGGATGAGTCCCA | |
LF | TCGCACCGTAATTATGACT | |
LB | AGATGGAAGAGTGCGTGGG | |
PCR primer set | F | ATTCTGGGTAGCGTGGCATT |
R | CTCTTCCATCTACCGGGCAC | |
S. typhimurium invA gene (aM90846.1) | ||
LAMP primer set [27] | F3 | CTGGACATTGTTGATTCAGGTA |
B3 | ACATCACGGTAGCTCAGA | |
FIP | GAAGGTGCCGAGAATAGCCAGCAAGTTCAACGCGCAATT | |
BIP | TTCGTGAAACGCTGAAYGGAACTGACGACGGGTTAAATTAG | |
LF | TCCGCCTGGTAACGAGTA | |
LB | TCACCAGGAGATTACAACATGG | |
PCR primer set | F | CAATGGCGGCGAATTACGAG |
R | AGGAAGGTACTGCCAGAGGT |
aGenBank accession number