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. 2022 Oct 15;298(12):102598. doi: 10.1016/j.jbc.2022.102598

Table 1.

Data collection and refinement statistics

Aer-PAS-GVV PDB ID: 8DIK
Data collection
Space group P21
Cell dimensions
 a, b, c (Å) 24.59, 62.95, 78.01
 α, β, γ (°) 90, 89.96, 90
Resolution (Å) 49.0–2.40 (2.44–2.40)a
Rmeasb 0.168 (0.586)
I/σI 11.0 (1.6)
Completeness (%) 99.4 (98.7)
Redundancy 6.4 (5.0)
CC1/2 0.978 (0.927)
Refinement
Resolution (Å) 49.0–2.40 (2.53–2.40)
No. of reflections 9349
Rworkc 0.254 (0.301)
Rfreed 0.275 (0.353)
No. of atomsd
 Protein 1911
 Ligand/ion 106
 Water 52
B-factors (Å2)
 Protein 29.1
 Ligand/ion 31.2
 Water 25.4
 Wilson 29.6
R.M.S. deviations
 Bond lengths (Å) 0.003
 Bond angles (°) 0.523
MolProbity validatione
 MolProbity Ramachandran outliers (%) 0.43
 MolProbity Ramachandran favored (%) 95.3
 MolProbity rotamer outliers (%) 0.00
 MolProbity C-beta outliers 0
 MolProbity clashscore 7.8
 MolProbity protein geometry score 1.7
a

Values in parentheses are for highest resolution shell.

b

Rmeas=hl(nhnh1)12|IhlIh|hlIhl QUOTE , where h represents the indices of the unique reflections, hl denotes the nh symmetry–related reflections to h, and (|Ihl-Ih|) is the absolute difference of the observed intensities to their mean intensity Ih.

c

Rwork=h||Fo||Fc||h|Fo|where |Fo| represents the observed structure factor and |Fc| represents the calculated structure factor amplitude. Rfree is calculated against 10% of the reflections removed from refinement at random.

d

Hydrogen atoms not included in counts.

e

MolProbity was used to analyze the structure.