Table 1.
Data collection and refinement statistics
| Aer-PAS-GVV PDB ID: 8DIK | |
|---|---|
| Data collection | |
| Space group | P21 |
| Cell dimensions | |
| a, b, c (Å) | 24.59, 62.95, 78.01 |
| α, β, γ (°) | 90, 89.96, 90 |
| Resolution (Å) | 49.0–2.40 (2.44–2.40)a |
| Rmeasb | 0.168 (0.586) |
| I/σI | 11.0 (1.6) |
| Completeness (%) | 99.4 (98.7) |
| Redundancy | 6.4 (5.0) |
| CC1/2 | 0.978 (0.927) |
| Refinement | |
| Resolution (Å) | 49.0–2.40 (2.53–2.40) |
| No. of reflections | 9349 |
| Rworkc | 0.254 (0.301) |
| Rfreed | 0.275 (0.353) |
| No. of atomsd | |
| Protein | 1911 |
| Ligand/ion | 106 |
| Water | 52 |
| B-factors (Å2) | |
| Protein | 29.1 |
| Ligand/ion | 31.2 |
| Water | 25.4 |
| Wilson | 29.6 |
| R.M.S. deviations | |
| Bond lengths (Å) | 0.003 |
| Bond angles (°) | 0.523 |
| MolProbity validatione | |
| MolProbity Ramachandran outliers (%) | 0.43 |
| MolProbity Ramachandran favored (%) | 95.3 |
| MolProbity rotamer outliers (%) | 0.00 |
| MolProbity C-beta outliers | 0 |
| MolProbity clashscore | 7.8 |
| MolProbity protein geometry score | 1.7 |
Values in parentheses are for highest resolution shell.
QUOTE , where h represents the indices of the unique reflections, hl denotes the nh symmetry–related reflections to h, and (|Ihl-Ih|) is the absolute difference of the observed intensities to their mean intensity Ih.
where |Fo| represents the observed structure factor and |Fc| represents the calculated structure factor amplitude. Rfree is calculated against 10% of the reflections removed from refinement at random.
Hydrogen atoms not included in counts.
MolProbity was used to analyze the structure.