Extended Data Fig. 3. Phase separation property of H2B.8.
a, Alignment of Arabidopsis H2B variants (N-terminal tail – upper panel, C-terminal body – lower panel). The N-terminal tail IDR of H2B.8 is highlighted with a yellow dashed box. Amino acids are colored according to the RasMol scheme. b, Intrinsic disorder prediction of H2B.8 (red) and H2B.2, a canonical H2B (blue), by PONDR. Histone profiles are aligned at the interchange between tail and body domains (dashed line). H2B.8 N-terminal tail IDR is highlighted in yellow. c, SDS-PAGE of reconstituted histone octamers containing H2B.2, H2B.8, H2B.8ΔIDR or H2B.8-scrambledIDR. For gel source data, see Supplementary Fig. 1. d, Fluorescence recovery after photobleaching (FRAP) of H2B.2- or H2B.8-containing chromatin droplets. Average relative fluorescence intensity of the photobleached area across 6 individual chromatin droplets was calculated and displayed at each time point. Error bars, ±SD. Scale bars, 1 μm. e, Fusion of H2B.2- or H2B.8-containing chromatin droplets (histone H3 and dsDNA were labeled with AF594 and YOYO-1, respectively) over time. Data shown represent one representative experiment, which has been performed twice with similar results. Scale bars, 1 μm. f, g, In vitro phase separation of nucleosomal arrays (NA) containing H2B.2, H2B.8 or H2B.8ΔIDR at indicated salt and NA concentrations (in g, NA concentration for all panels was 50 nM). Histone H3 and dsDNA were labeled with AF594 and YOYO-1, respectively, and merged images of red and green channels are shown. Data shown represent one representative experiment, which has been performed three times with similar results. Scale bars, 2 μm. h, Nuclear size quantification of Nicotiana benthamiana epidermis cell nuclei transiently expressing native and chimeric H2B.8 as indicated. Boxplots marked as A and B are significantly different between groups (P < 0.001) but not within the group (P > 0.1). n = 30 (WT, p35S::H2B.8-EWSR1-IDR-eGFP, and p35S::H2B.8-TAF15-IDR-eGFP), 32 (p35S::H2B.8-eGFP), and 33 (p35S::H2B.8-scrambledIDR-eGFP) nuclei from two independent experiments.