TABLE 3.

Trait-linked SSRs flanking candidate genes in V. radiata.

S. No.	Marker name	Genes of V. radiata var. radiata nesting SSR markers	Start and end of forward primer	Start and end of reverse primer	Amplicon length in V. radiata	SSR motifs in V. radiata var. radiata
1	CP00361	Uncharacterized LOC106765295	322–345	106–129	240	(CT)5N(CT)5N (TC)8
2	CEDG100	Histone–lysine N-methyltransferase ATX5 (LOC106775878)	283–304	465–444	183	(CT)6N (TC)9
3	CEDG220	CHR7; intergenic between LOC106768487 (42,176,444.42,178,582) and LOC106767283 (42,196,013.42,199,609)	152–172	23–44	150	(CT)12
4	VR022	SHOOT GRAVITROPISM 5 (LOC106774869)	66–92	188–209	144	(TCTA)5N (TC)5
5	VR039	Putative UPF0481 protein At3g02645 (LOC106767008)	1,117–1,138	1,226–1,246	130	(AGA)5