TABLE 1.
Characteristic | Data for strain: |
|||||||
---|---|---|---|---|---|---|---|---|
DGY1657 | DGY1728 | DGY1734 | DGY1736 | DGY1740 | DGY1744 | DGY1747 | DGY1751 | |
Illumina data | ||||||||
SRA accession no. | SRR7057840 | SRR7057779 | SRR7057829 | SRR7057832 | SRR7057777 | SRR7057833 | SRR7057780 | SRR7057828 |
Total no. of reads | 3,653,321 | 6,229,610 | 1,760,584 | 5,401,867 | 4,531,223 | 5,447,512 | 4,709,699 | 3,272,815 |
Nanopore data | ||||||||
SRA accession no. | SRR10525523 | SRR19440503 | SRR19440502 | SRR19440501 | SRR19440500 | SRR10525517 | SRR19440499 | SRR19440498 |
Total no. of reads | 47,436 | 194,350 | 44,825 | 40,245 | 88,706 | 140,456 | 30,289 | 343,924 |
N50 (bp) | 8,324 | 625 | 1,929 | 1,954 | 1,198 | 414 | 2,449 | 2,074 |
Estimated coverage depth (×) | 56.6 | 30.1 | 15.4 | 15.5 | 26.9 | 48.5 | 17.2 | 137.3 |
Assembly N50 (bp) | 740,333 | 818,015 | 266,864 | 751,856 | 813,575 | 810,678 | 666,227 | 781,298 |
BUSCO (%) | 96.10 | 99.30 | 90.20 | 98.60 | 99.40 | 99.40 | 98.90 | 97.50 |
GC (%) | 38.20 | 38.10 | 38.30 | 38.20 | 38.30 | 38.30 | 38.30 | 38.20 |
No. of contigs | 20 | 32 | 68 | 30 | 22 | 20 | 30 | 36 |
GenBank accession no. | JAMQBG000000000 | JAMQBF000000000 | JAMQBE000000000 | JAMQBD000000000 | JAMQBC000000000 | JAMQBB000000000 | JAMQBA000000000 | JAMQAZ000000000 |