Liu 2021.
Study characteristics | |||
Patient Sampling | Purpose: Diagnosis of acute or asymptomatic infection Design: [1] Confirmed COVID cases (n = 111) [1a] Symptomatic cases (n = 81) [1b] Asymptomatic cases (n = 30) [2] Non‐COVID patients (suspected COVID with multiple negative PCR tests) (n = 40) Recruitment: There were 111 patients with positive RT‐PCR test results at the time of admission and 40 suspected patients from Feb 3 to Mar 13 were enrolled. The suspected cases were based on clinical manifestation, chest radiography and epidemiology. All suspected patients were eventually "excluded from diagnosis" [and used as non‐COVID controls] based on clinical judgement as well as multiple negative RT‐PCR tests. Prospective or retrospective: Retrospective Sample size: 151 (111) patients, sample size unclear (65 COVID patients had a second blood sample and 54/62 discharged patients gave blood samples again in later check‐ups) 151 (111) samples seemed to be relevant for our review. Further detail: Inclusion: [1] rt‐PCR‐positive cases admitted to Union Jiangbei Hospital, Wuhan, China, from Feb 3 to Mar 13, 2020 [2] Suspected patients that were eventually excluded from diagnosis based on clinical judgement as well as multiple negative RT‐PCR tests |
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Patient characteristics and setting | Setting: Hospital inpatients Location: Union Jiangbei Hospital, Wuhan, China Country: China Dates: Feb 3 to Mar 13 2020 Symptoms and severity: [1a] Symptomatic (n = 81); 17 (15.5%) severe, 42 (38.2%) common, 22 (20%) mild [1b] Asymptomatic (n = 30) Demographics: [1a] Age: Median 56 (range 23, 93) years; 48/81 (59.2%) male [1b] Age: Median 56.5 (range 20, 94) years; 22/30 (73.3%) Exposure history: Possibly all from Wuhan/Hubei province Non‐Covid group 1: [2] Suspected COVID cases with negative PCR Source: Union Jiangbei Hospital, Wuhan, China from Feb 3 to Mar 13, 2020 Characteristics: Age: Median 48.5 (range 23, 98) years; 23/40 (57.4%) male Non‐Covid group 2: NA |
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Index tests | Test name: "COVID‐19 IgG Detection Kits" Manufacturer: Hunan Yuanjing Biotechnology Co., Ltd. Antibody: IgM, IgG Antigen target: SARS‐CoV‐2 spike receptor‐binding domain (S‐RBD) and N spike‐protein as antigens Evaluation setting: Lab test performed in lab Test method: Magnetic Beads Chemiluminescent Immunoassay Timing of samples: [1a] First sample (n = 81): Median 7 days (range 4, 14) after symptom onset [1b] First sample (n = 30): Median 8 days (range 7, 9) after the positive RT‐PCR test detection [2] Median 9.5 (range 5, 12) day after symptom onset (n = 40) Samples used: Serum Test operator: Not stated Definition of test positivity: The test results in the sample were expressed in COI. Threshold not stated Blinding reported: no Threshold predefined: not stated |
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Target condition and reference standard(s) | Reference standard: real‐time RT‐PCR amplification of SARS‐CoV‐2 open reading frame 1ab (ORF1ab), nucleocapsid protein (NP) genes fragments using kits (Shanghai BioGerm Biotechnology Co., Ltd)
Conditions for amplification were 50 C for 10 min, 95 C for 5 min, followed by 40 cycles of 95 C for 10 s and 55 C for
40 s. The case would be considered to be laboratory confirmed when two targets (ORF1ab, NP) tested positive using specific real‐time RT‐PCR [19].
A cycle threshold value (Ct‐value) <= 38 was defined as a positive test, and a Ct‐value of > 38 was defined as a negative test. Samples used: nasopharyngeal swab Timing of reference standard: Not stated Blinded to index test: Yes, prior index test Incorporated index test: no Definition of non‐COVID cases: real‐time RT‐PCR amplification of SARS‐CoV‐2 open reading frame 1ab (ORF1ab), nucleocapsid protein (NP) genes fragments using kits (Shanghai BioGerm Biotechnology Co., Ltd) Conditions for amplification were 50 C for 10 min, 95 C for 5 min, followed by 40 cycles of 95 C for 10 s and 55 C for 40 s. The case would be considered to be laboratory confirmed when two targets (ORF1ab, NP) tested positive using specific real‐time RT‐PCR [19]. A cycle threshold value (Ct‐value) <= 38 was defined as a positive test, and a Ct‐value of > 38 was defined as a negative test. Classed as "Non‐COVID” control based on clinical judgement as well as multiple negative RT‐PCR tests Samples used: nasopharyngeal swab Timing of reference standard: Not stated Blinded to index test: Yes, prior index test Incorporated index test: no |
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Flow and timing | Time interval between index and reference tests: [1a] and [2] Not stated [1b] Median 8 days (range 7, 9) after the positive RT‐PCR test detection All patients received same reference standard: yes Missing data: Not stated Uninterpretable results: Not stated Indeterminate results: Not stated Unit of analysis: Samples but only 1 sample per time split |
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Comparative | |||
Notes | Funding: This study was supported by the National Key R&D Programme of China [2019YFF0216303]. Publication status: Published paper Source: Annals of Medicine Author COI: No potential conflict of interest was reported by the author(s). |
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Methodological quality | |||
Item | Authors' judgement | Risk of bias | Applicability concerns |
DOMAIN 1: Patient Selection | |||
Was a consecutive or random sample of patients enrolled? | Unclear | ||
Was a case‐control design avoided? | No | ||
Did the study avoid inappropriate exclusions? | Unclear | ||
Did the study avoid inappropriate inclusions? | Unclear | ||
Could the selection of patients have introduced bias? | High risk | ||
Are there concerns that the included patients and setting do not match the review question? | High | ||
DOMAIN 2: Index Test (All tests) | |||
DOMAIN 2: Index Test (Antibody tests) | |||
Were the index test results interpreted without knowledge of the results of the reference standard? | Unclear | ||
If a threshold was used, was it pre‐specified? | Yes | ||
Could the conduct or interpretation of the index test have introduced bias? | Unclear risk | ||
Are there concerns that the index test, its conduct, or interpretation differ from the review question? | Unclear | ||
DOMAIN 3: Reference Standard | |||
Is the reference standards likely to correctly classify the target condition? | Yes | ||
Were the reference standard results interpreted without knowledge of the results of the index tests? | Yes | ||
The reference standard does not incorporate the index test | Yes | ||
Could the reference standard, its conduct, or its interpretation have introduced bias? | Low risk | ||
Are there concerns that the target condition as defined by the reference standard does not match the question? | High | ||
DOMAIN 4: Flow and Timing | |||
Was there an appropriate interval between index test and reference standard? | Unclear | ||
Did all patients receive the same reference standard? | No | ||
Were all patients included in the analysis? | Unclear | ||
Did all participants receive a reference standard? | Yes | ||
Were results presented per patient? | Yes | ||
Could the patient flow have introduced bias? | High risk |