Sun 2020.
Study characteristics | |||
Patient Sampling | Purpose: Diagnosis of current acute‐phase infection and current convalescent‐phase infection Design: Two‐group study to estimate sensitivity and specificity [1] Confirmed COVID patients (209 samples from 35 patients) [2] Healthy close contacts (n = 21) Group [2] excluded from review as < 25 samples Recruitment: [1] From 23 January to 27 February 2020, 38 hospitalised COVID‐19 cases were consecutively recruited. Prospective or retrospective: Prospective Sample size: 56 (35) patients with 230 (209) samples of which 209 (209) samples were eligible for our review Sensitivity results reported for 70 (70) samples Further detail: Inclusion: Hospitalised COVID‐19 cases in two designated hospitals for COVID‐19 between 23 January and 27 February 2020 Exclusion: [1] One mild and two severe cases were transferred to other hospitals after hospitalisation in these two hospitals and were excluded from this study. |
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Patient characteristics and setting | Setting: Hospital inpatients Location: Two designated hospitals for COVID‐19, the Guangdong Seconded Provincial General Hospital and the First Hospital of Foshan in Guangdong, China Country: China Dates: 23 January to 27 February 2020 Symptoms and severity: 28 mild and 7 severe cases Demographics: Not stated Exposure history: Not stated |
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Index tests | Test name: [A] Cat. no. IEQ‐CoVS1RBD‐IgG [B] Cat. No. IE‐CoVS1RBD‐IgA [C] Cat. No. IE‐CoVS1RBD‐IgM Manufacturer: [A] ‐ [C] RayBiotech, GA, USA Antibody: [A] IgG [B] IgA [C] IgM Antigen target: [A] ‐ [C] RBD (from cat. No.) Evaluation setting: [A] ‐ [C] Laboratory tests performed in lab Test method: [A] ELISA [B] ELISA [C] ELISA Timing of samples: Serum samples were collected prospectively from cases every 3 days from hospitalisation until the date of discharge from hospital. Samples used: Serum Test operator: L.C., Z.L., H.L., R.Y., Z.P., H.X., X.Q., P.J., C.F., K.B., S.J., L.Z. and L.J. carried out the investigations. All from Guangdong Provincial Institute of Public Health, Guangdong Provincial Centre for Disease Control and Prevention, Guangzhou, China Definition of test positivity: According to the manufacturer's instructions, threshold not stated Blinding reported: Not stated Threshold predefined: yes, according to the manufacturer's instructions |
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Target condition and reference standard(s) | Reference standard: The laboratory‐confirmed case was defined as a case with respiratory specimens that tested positive for the SARS‐CoV‐2 by at least one of the following three methods: isolation of virus, positive results of real time reverse transcription polymerase chain reaction (rRT‐PCR) assay or a genome sequence that matched SARS‐CoV‐2.
A commercial rRT‐PCR kit targeting the ORF1ab and N genes was used to detect SARS‐CoV‐2 RNA (DaAn Gene, Guangzhou, China. Cat.No.DA0931).
Amplification was performed on an Applied Biosystems™ 7500 machine (ThermoFisher Scientific, USA). Specimens were considered positive for SARS‐CoV‐2 RNA if both ORF1ab and N gene target amplification curves were generated within 40 cycles. Samples used: Respiratory specimens Timing of reference standard: Not stated Blinded to index test: yes, prior to index test Incorporated index test: no |
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Flow and timing | Time interval between index and reference tests: Not stated All patients received same reference standard: yes Missing data: yes, group [2] excluded from review. No sensitivity data reported for test [C]; sensitivity results not available for all time points Uninterpretable results: Not stated Indeterminate results: Not stated Unit of analysis: Samples |
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Comparative | |||
Notes | Funding: This work was supported by grants from the Guangdong Provincial Novel Coronavirus Scientific and Technological Project (2020111107001) and Guangzhou Novel Coronavirus Scientific and Technological Project (202008040004). Publication status: Published paper Source: Clinical Microbiology and Infection Author COI: All authors reported no conflicts of interest relevant to this article. |
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Methodological quality | |||
Item | Authors' judgement | Risk of bias | Applicability concerns |
DOMAIN 1: Patient Selection | |||
Was a consecutive or random sample of patients enrolled? | Yes | ||
Was a case‐control design avoided? | No | ||
Did the study avoid inappropriate exclusions? | Yes | ||
Did the study avoid inappropriate inclusions? | Yes | ||
Could the selection of patients have introduced bias? | High risk | ||
Are there concerns that the included patients and setting do not match the review question? | High | ||
DOMAIN 2: Index Test (All tests) | |||
DOMAIN 2: Index Test (Antibody tests) | |||
Were the index test results interpreted without knowledge of the results of the reference standard? | Unclear | ||
If a threshold was used, was it pre‐specified? | Yes | ||
Could the conduct or interpretation of the index test have introduced bias? | Unclear risk | ||
Are there concerns that the index test, its conduct, or interpretation differ from the review question? | Low concern | ||
DOMAIN 3: Reference Standard | |||
Is the reference standards likely to correctly classify the target condition? | Yes | ||
Were the reference standard results interpreted without knowledge of the results of the index tests? | Yes | ||
The reference standard does not incorporate the index test | Yes | ||
Could the reference standard, its conduct, or its interpretation have introduced bias? | Low risk | ||
Are there concerns that the target condition as defined by the reference standard does not match the question? | High | ||
DOMAIN 4: Flow and Timing | |||
Was there an appropriate interval between index test and reference standard? | Unclear | ||
Did all patients receive the same reference standard? | Yes | ||
Were all patients included in the analysis? | No | ||
Did all participants receive a reference standard? | Yes | ||
Were results presented per patient? | No | ||
Could the patient flow have introduced bias? | High risk |