Table 1.
General features of sequenced symbiont genomes of Ce. japonica and the closely related species
|
Buchnera |
Arsenophonus |
Hamiltonella |
|||||
|---|---|---|---|---|---|---|---|
| Ce. japonica | Ci. cedri | A. pisum | Ce. japonica | L. cervi | N. vitripennis | Ce. japonica | |
| Genome size (bp) | 432,286 | 422,434 | 655,725 | 853,149 | 836,724 | 4,987,107 | 2,258,324 |
| Chromosome size (bp) | 414,725 | 416,380 | 640,681 | 853,149 | 836,724 | 3,871,978 | 2,258,324 |
| Number of contigs | 3 | 2 | 3 | 1 | 1 | 18 | 1 |
| Plasmid | 2 | 1 | 2 | 0 | 0 | 17 | 0 |
| GC (%) | 20.0 | 20.1 | 26.3 | 18.5 | 24.9 | 40.2 | 41.2 |
| Coding density (%) | 87.3 | 84.6 | 86.0 | 59.9 | 73.1 | 75.7 | 82.8 |
| Protein-coding genes | 387 | 369 | 574 | 512 | 619 | 4,712 | 2,097 |
| tRNA | 30 | 31 | 31 | 32 | 35 | 70 | 42 |
| rRNA | 3 | 3 | 3 | 3 | 3 | 22 | 9 |
| Pseudogene | 7 | 2 | 13 | 11 | 17 | 485 | 72 |
Buchnera aphidicola of Cinara cedri (GenBank: GCA_000090965.1); B. aphidicola of Acyrthosiphon pisum (GCA_000009605.1); Candidatus Arsenophonus lipoptenae of Lipoptena cervi (GCA_001534665.1); Arsenophonus nasoniae of Nasonia vitripennis (GCA_004768525.1).