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. 2022 Oct 21;102(1):102269. doi: 10.1016/j.psj.2022.102269

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© 2022 The Authors

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

PMC Copyright notice

Phylogeny and population genetics of three geese breeds. (A) The neighbor-joining phylogenetic tree of 141 geese was constructed based on 10,459,469 SNPs. (B) Two-dimensional principal component analysis (PCA) plot of three geese breeds. (C) Genetic structure of three geese breeds according to ADMIXTURE, with K = 2–3. (D) The total length of runs of homozygosity (ROH) of each breed. (E) The inbreeding coefficient (F) of each breed. (F) Linkage disequilibrium (LD) analysis for three geese breeds. Abbreviations: FCG, Fengcheng gray goose; GFW, Guangfeng white goose; LXW, Lingxian white goose.