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. 2022 Nov 14;14(1):2143006. doi: 10.1080/19420862.2022.2143006

Figure 5.

Figure 5.

Kernel density estimation plots for the ϕ & ψ dihedral angles populated in MD simulations combined for all 1039 residues that neighbor Asp (top) or Asn (bottom) in the Adimab dataset. The ϕ & ψ angle distributions were collected from μs long equilibrium MD simulations and classified as reactive (left) and non-reactive (right) based on the measurements reported in the Adimab dataset. A clear pattern emerges around the left-handed α-helix conformation in reactive cases that is distinct from the non-reactive cases on the right.