Table 2.

Sequencing statistics of BSA-seq samples

Sample	Raw reads	Clean reads	Q30 Percentage (%)	Mapped reads	Mapping rate (%)	Coverage 1X (%)	Coverage 4X (%)	Coverage 10X(%)
P131	187,937,372	171,855,518	91.49	171,713,436	91.37	95.35	94.22	89.83
W3	202,002,394	183,065,950	91.97	182,339,950	90.27	95.29	94.20	89.88
F2-1	209,992,928	192,113,997	92.33	192,362,254	91.60	95.78	94.90	91.14
F2-0	158,059,030	143,856,847	91.08	144,321,550	91.31	95.69	94.00	86.74