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. Author manuscript; available in PMC: 2022 Nov 21.
Published in final edited form as: Results Probl Cell Differ. 2022;70:625–663. doi: 10.1007/978-3-031-06573-6_23

Table 3.

Actin-detecting probes.

Probe Description Mechanisms Pitfalls
Actin-chromobody [259] A DNA plasmid encoding an anti-actin VHH nanobody fused to a fluorescent protein. Fluorescent-labeled nanobody labels endogenous actin by antigen-antibody reaction. High background when transient transfected into cells. Signal quenching after cell fixation.
Actin-GFP [260] A DNA plasmid encoding human actin fused to GFP. Ectopic expression of fluorescent-labeled actin into cells. Interfere with the physiological actin dynamics.
F-tractin [261] A DNA plasmid encoding N-terminus 10–52 AA peptides of rat inositol-trisphosphate 3-kinase (Itpk) [262]. Itpk has a F-actin specifically binding domain at the N-terminus 1–66 AA region [263]. Inhibit ABPs binding to F-actin.
Lifeact [264] A DNA plasmid encoding N-terminus 1–17 AA peptides of yeast ABP140 [265]. Lifeact binds to G-actin with an affinity 10-fold higher than F-actin. Alter F-actin organization [266].
Phalloidin [267] Bicyclic heptapeptide from death cap mushroom. Phalloidin specifically binds at the interface between subunits of F-actin, locking the F-actin structure and preventing depolymerization. Prevent F-actin depolymerization. Cytotoxicity.
SiR-actin [268] Silicon-rhodamine (SiR) conjugated to desbromo-desmethyl-jasplakinolide. SiR is a fluorophore [269]. Jasplakinolide binds at the interface of G-actin oligomers at the nucleation phase [270, 271]. Enhance F-actin polymerization. Cytotoxicity.
SPY-actin Improved version of the SiR-actin by utilizing SPY dyes instead of SiR.
UtrCH [272] A DNA plasmid encoding N-terminus 1–261 AA peptides of human utrophin. The N-terminus of utrophin has calponin-homology (CH) domains, which specifically binds to F-actin [273]. Alter F-actin organization.