REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Biological samples | ||
3-dose HCWs Sera | Evans et al.,1 Qu et al.4 | N/A |
Omicron BA.1-wave Infected Patient Sera | Evans et al.,1 Qu et al.4 | N/A |
Omicron BA.4/5-wave Infected First Responders and Household Contacts Sera | This paper | N/A |
Chemicals, peptides, and recombinant proteins | ||
Polyethylenimine (PEI) | Thermo Fisher Scientific | Cat# BMS1003 |
Dulbecco’s Modified Eagles Medium (DMEM) | Sigma-Aldrich | Cat#: 11965-092 |
Fetal Bovine Serum (FBS) | Thermo Fisher Scientific | Cat#: F1051 |
0.05% Trypsin + 0.53 mM EDTA | Corning | Cat# 25-052-CI |
Penicillin-Streptomycin | HyClone | Cat#: SV30010 |
Immobilon Crescendo Western HRP substrate | Millipore | Cat# WBLUR0500 |
QIAprep Spin Miniprep Kit | QIAGEN | Cat# 27106 |
Coelenterazine | GoldBio | Cat#: CZ2.5, CAS: 55779-48-1 |
Deposited data | ||
NT50 Values and De-identified patient data | SeroNet Coordinating Center, NCI, NIH | N/A |
Experimental models: Cell lines | ||
HEK293T | ATCC | Cat#: CRL-11268, RRID: CVCL_1926 |
HEK293T-ACE2 | BEI Resources | Cat#: NR-52511, RRID: CVCL_A7UK |
Calu-3 | ATCC | RRID: CVCL_0609 |
Recombinant DNA | ||
pNL4-3-inGluc | David Derse, NIH Maruzov et al.46 |
N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_D614G | GenScript Biotech Zeng et al.47 |
N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2 | GenScript Biotech Evans et al.1 |
N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5 | GenScript Biotech Qu et al.4 |
N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4.6 | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BF.7 | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BQ.1 | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BQ.1.1 | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75 | GenScript Biotech Qu et al.3 |
N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75.2 | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_K444T | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_N460K | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_N658S | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_R346T_K444T | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_R346T_N460K | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_F486S | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_D1199N | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T_F486S | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T_D1199N | This paper | N/A |
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_F486S_D1199N | This paper | N/A |
Software and algorithms | ||
GraphPad Prism | GraphPad Version 9.0.0 | www.graphpad.com |
SWISS-MODEL | Guex et al.48 | https://swissmodel.expasy.org/ |
PyMOL | Warren DeLano and Sarin Bromberg | https://pymol.org/ |
Other | ||
Cytation 5 Imaging Reader | BioTek | N/A |