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. 2022 Nov 22;31(1):9–17.e3. doi: 10.1016/j.chom.2022.11.012
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

3-dose HCWs Sera Evans et al.,1 Qu et al.4 N/A
Omicron BA.1-wave Infected Patient Sera Evans et al.,1 Qu et al.4 N/A
Omicron BA.4/5-wave Infected First Responders and Household Contacts Sera This paper N/A

Chemicals, peptides, and recombinant proteins

Polyethylenimine (PEI) Thermo Fisher Scientific Cat# BMS1003
Dulbecco’s Modified Eagles Medium (DMEM) Sigma-Aldrich Cat#: 11965-092
Fetal Bovine Serum (FBS) Thermo Fisher Scientific Cat#: F1051
0.05% Trypsin + 0.53 mM EDTA Corning Cat# 25-052-CI
Penicillin-Streptomycin HyClone Cat#: SV30010
Immobilon Crescendo Western HRP substrate Millipore Cat# WBLUR0500
QIAprep Spin Miniprep Kit QIAGEN Cat# 27106
Coelenterazine GoldBio Cat#: CZ2.5, CAS: 55779-48-1

Deposited data

NT50 Values and De-identified patient data SeroNet Coordinating Center, NCI, NIH N/A

Experimental models: Cell lines

HEK293T ATCC Cat#: CRL-11268, RRID: CVCL_1926
HEK293T-ACE2 BEI Resources Cat#: NR-52511, RRID: CVCL_A7UK
Calu-3 ATCC RRID: CVCL_0609

Recombinant DNA

pNL4-3-inGluc David Derse, NIH
Maruzov et al.46
N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_D614G GenScript Biotech
Zeng et al.47
N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2 GenScript Biotech
Evans et al.1
N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5 GenScript Biotech
Qu et al.4
N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4.6 This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BF.7 This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BQ.1 This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BQ.1.1 This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75 GenScript Biotech
Qu et al.3
N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75.2 This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_K444T This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_N460K This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_N658S This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_R346T_K444T This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.4/5_R346T_N460K This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_F486S This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_D1199N This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T_F486S This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_R346T_D1199N This paper N/A
pcDNA3.1-SARS-CoV-2-Flag-S-Flag_BA.2.75_F486S_D1199N This paper N/A

Software and algorithms

GraphPad Prism GraphPad Version 9.0.0 www.graphpad.com
SWISS-MODEL Guex et al.48 https://swissmodel.expasy.org/
PyMOL Warren DeLano and Sarin Bromberg https://pymol.org/

Other

Cytation 5 Imaging Reader BioTek N/A