Table 1. Strain identifiers and isolation data of the 80 Salmonella Infantis strains studied isolated from food (n = 27), farm and industry environments (n = 24), humans (n = 19), animals (n = 7) and animal feed (n = 3) between 2013 and 2018 in Brazil.
| Strain identifiers and accession numbers | Isolation data | ||||
|---|---|---|---|---|---|
| Strain/Year | CFSAN no. | GenBank no. | Material | Source | State |
| SI 1348/13 | CFSAN107127 | AAWRHH000000000.1 | Human feces | Human | PR |
| SI 2385/13 | CFSAN107129 | AAWRGU000000000.1 | Soy | Food | PR |
| SI 2950/13 | CFSAN107130 | AAWRHS000000000.1 | Human feces | Human | AL |
| SI 2951/13 | CFSAN107131 | AAWRHN000000000.1 | Human feces | Human | AL |
| SI 3156/13 | CFSAN107132 | AAWRGH000000000.1 | Disposable shoe cover | Environment | SC |
| SI 5025/13 | CFSAN107133 | AAWRGA000000000.1 | Human feces | Human | SC |
| SI 124/14 | CFSAN107134 | AAWRDW000000000.1 | Swine feces | Animal | RS |
| SI 210/14 | CFSAN107136 | AAWREM000000000.1 | Dragging swab | Environment | SC |
| SI 212/14 | CFSAN107137 | AAWRDZ000000000.1 | Dragging swab | Environment | SC |
| SI 388/14 | CFSAN107138 | AAWRER000000000.1 | Soybean animal meal | Animal feed | SP |
| SI 583/14 | CFSAN107139 | AAWREP000000000.1 | Chicken carcass | Food | SC |
| SI 584/14 | CFSAN107140 | AAWREX000000000.1 | Pasta containing ham | Food | SC |
| SI 677/14 | CFSAN107141 | AAWRFG000000000.1 | Carcass cleaning wipe | Food | SC |
| SI 723/14 | CFSAN107142 | AAWRFD000000000.1 | Dragging swab | Environment | SC |
| SI 982/14 | CFSAN107143 | AAWRHV000000000.1 | Chicken feces | Animal | RS |
| SI 1143/14 | CFSAN107144 | AAWRHU000000000.1 | Chicken feces | Animal | RS |
| SI 1284/14 | CFSAN107145 | AAWRIM000000000.1 | Dragging swab | Environment | SC |
| SI 1380/14 | CFSAN107146 | AAWRIF000000000.1 | Chicken feces | Animal | RS |
| SI 1408/14 | CFSAN107148 | AAWRIL000000000.1 | Human feces | Human | RS |
| SI 1409/14 | CFSAN107149 | AAWRHF000000000.1 | Human feces | Human | RS |
| SI 1441/14 | CFSAN107150 | AAWRHL000000000.1 | Mayonnaise | Food | RS |
| SI 1711/14 | CFSAN107151 | AAYKFJ000000000.1 | Chicken feces | Animal | RS |
| SI 2378/14 | CFSAN107152 | AAWRHR000000000.1 | Truck swab | Environment | SC |
| SI 2430/14 | CFSAN107153 | AAWRHO000000000.1 | Mixed meat sausage | Food | SC |
| SI 2461/14 | CFSAN107154 | AAWRGI000000000.1 | Chicken carcass | Food | SC |
| SI 2463/14 | CFSAN107155 | AAYKFK000000000.1 | Chicken carcass | Food | SC |
| SI 2548/14 | CFSAN107156 | AAWRDS000000000.1 | Chicken feces | Animal | RS |
| SI 3836/14 | CFSAN107160 | AAXBHC000000000.1 | Dragging swab | Environment | RS |
| SI 4882/14 | CFSAN107164 | AAXBHW000000000.1 | Chicken carcass | Food | MG |
| SI 4892/14 | CFSAN107165 | AAXAKM000000000.1 | Chicken wings | Food | MG |
| SI 4895/14 | CFSAN107166 | AAXAKH000000000.1 | Chicken carcass | Food | MG |
| SI 4901/14 | CFSAN107167 | AAXAKN000000000.1 | Pig snout | Food | MG |
| SI 5247/14 | CFSAN107168 | AAXAKJ000000000.1 | Chicken upper leg and thigh | Food | MG |
| SI 342/15 | CFSAN107171 | AAXHSY000000000.1 | Swine heart | Food | SC |
| SI 444/15 | CFSAN107172 | AAXHRH000000000.1 | Pork filet | Food | SC |
| SI 447/15 | CFSAN107173 | AAXHRI000000000.1 | Smoked and salted pork meat | Food | SC |
| SI 1809/15 | CFSAN107179 | AAXHSE000000000.1 | Meat animal meal | Animal feed | SC |
| SI 1816/15 | CFSAN107180 | AAXHVG000000000.1 | Poultry viscera animal meal | Animal feed | SC |
| SI 2280/15 | CFSAN107182 | AAXHUK000000000.1 | Chicken carcass | Food | SC |
| SI 2302/15 | CFSAN107183 | AAXHUC000000000.1 | Cleaning wipe | Environment | SC |
| SI 2370/15 | CFSAN107185 | AAXHUH000000000.1 | Carcass cleaning wipe | Food | SC |
| SI 2869/15 | CFSAN107190 | AAXHUP000000000.1 | Chicken upper leg | Food | MG |
| SI 3056/15 | CFSAN107193 | AAXHUJ000000000.1 | Chicken carcass | Food | MG |
| SI 4764/15 | CFSAN107197 | AAXHVH000000000.1 | Cleaning wipe | Environment | SC |
| SI 5391/15 | CFSAN107200 | AAXHUD000000000.1 | Disposable shoe cover | Environment | SC |
| SI 5837/15 | CFSAN107201 | AAXHTN000000000.1 | Disposable shoe cover | Environment | SC |
| SI 5853/15 | CFSAN107202 | AAXJLL000000000.1 | Disposable shoe cover | Environment | SC |
| SI 5859/15 | CFSAN107203 | AAXHWB000000000.1 | Disposable shoe cover | Environment | SC |
| SI 5911/15 | CFSAN107204 | AAXHVK000000000.1 | Cleaning wipe | Environment | SC |
| SI 5912/15 | CFSAN107205 | AAYKGL000000000.1 | Cleaning wipe | Environment | SC |
| SI 5915/15 | CFSAN107206 | AAYKGJ000000000.1 | Cleaning wipe | Environment | SC |
| SI 5923/15 | CFSAN107207 | AAYKGQ000000000.1 | Cleaning wipe | Environment | SC |
| SI 220/16 | CFSAN107212 | AAYKGB000000000.1 | Cleaning wipe | Environment | SC |
| SI 3687/16 | CFSAN107222 | AAYKGA000000000.1 | Chicken carcass | Food | SC |
| SI 4447/16 | CFSAN107224 | AAYKGC000000000.1 | Pork sausage | Food | SC |
| SI 5946/16 | CFSAN107226 | AAYAAA000000000.1 | Pork rib | Food | SC |
| SI 6987/16 | CFSAN107229 | AAYAIC000000000.1 | Human feces | Human | MA |
| SI 7876/16 | CFSAN107233 | AAYAFO000000000.1 | Human feces | Human | RS |
| SI 11/17 | CFSAN107235 | AAYARD000000000.1 | Dragging swab | Environment | PR |
| SI 23/17 | CFSAN107237 | AAYAFK000000000.1 | Dragging swab | Environment | PR |
| SI 238/17 | CFSAN107238 | AAYAFN000000000.1 | Dragging swab | Environment | PR |
| SI 872/17 | CFSAN107239 | AAYAFR000000000.1 | Chicken carcass | Food | MG |
| SI 1171/17 | CFSAN107242 | AAYAFL000000000.1 | Soil | Environment | SP |
| SI 1256/17 | CFSAN107243 | AAYAFP000000000.1 | Soil | Environment | SP |
| SI 2580/17 | CFSAN107259 | AAYKFO000000000.1 | Human feces | Human | SC |
| SI 2953/17 | CFSAN107261 | AAYKFZ000000000.1 | Human fecal swab | Human | GO |
| SI 2954/17 | CFSAN107262 | AAYKFE000000000.1 | Human fecal swab | Human | GO |
| SI 3380/17 | CFSAN107263 | AAYKFP000000000.1 | Human fecal swab | Human | GO |
| SI 3877/17 | CFSAN107264 | AAYKFX000000000.1 | Chicken wings | Food | MG |
| SI 3906/17 | CFSAN107265 | AAYKFS000000000.1 | Sieve residue | Environment | SP |
| SI 4065/17 | CFSAN107266 | AAYKFR000000000.1 | Human feces | Human | PR |
| SI 4067/17 | CFSAN107267 | AAYKGD000000000.1 | Human feces | Human | PR |
| SI 4069/17 | CFSAN107268 | AAYKFD000000000.1 | Human blood | Human | PR |
| SI 52/18 | CFSAN107270 | AAYKFI000000000.1 | Chicken carcass | Food | MG |
| SI 331/18 | CFSAN107273 | AAYKFT000000000.1 | Human fecal swab | Human | GO |
| SI 623/18 | CFSAN107279 | AAYKFY000000000.1 | Human feces | Human | SC |
| SI 661/18 | CFSAN107280 | AAYKFW000000000.1 | Human feces | Human | MS |
| SI 942/18 | CFSAN107281 | AAYKFM000000000.1 | Human fecal swab | Human | RS |
| SI 1634/18 | CFSAN107284 | AAYKFQ000000000.1 | Yellowtail amberjack fish meat | Food | SC |
| SI 2676/18 | CFSAN107285 | AAYKFF000000000.1 | Avian reproductive matrix | Animal | GO |
Cleaning wipe: similar to synthetic tissues for domestic cleaning sold commercially; employed in the isolation procedure of microorganisms from surfaces in Brazil.
AL, Alagoas; BA, Bahia; GO, Goiás; MA, Maranhão; MG, Minas Gerais; MS, Mato Grosso do Sul; PE, Pernambuco; PR, Paraná; RS, Rio Grande do Sul; SC, Santa Catarina; SP, São Paulo.
These data are available in details at Vilela et al. 2021 [23].