Table of Materials
| Name | Company | Catalog Number | Comments |
|---|---|---|---|
| 0.5M EDTA, pH 8.0 | Fisher Scientific | 15575-020 | |
| 1.5 mL microcentrifuge tubes | Fisher Scientific | 05-408-129 | |
| 15 mL Conical tube | VWR | 89039-666 | |
| CellTiter-Glo 3D Cell Viability Assay | Promega | G9681 | |
| Corning Costar Ultra-Low Attachment 24-Well Microplates | Fisher Scientific | 07-200-602 | |
| Cover Glass 24 x 60 | Thermo Scientific | 102460 | |
| Donkey anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | Thermo Scientific | A-21202 | |
| Donkey Anti-Rabbit IgG Antibody, Cy3 conjugate | Sigma-Aldrich | AP182C | |
| Dulbecco's Modified Eagle's Medium/Nutrient Ham's Mixture F-12 (DMEM-F12) with 15 mM HEPES buffer | STEMCELL Technologies | 36254 | |
| E-cadherin antibody (7H12) | Novus Biologicals | NBP2-19051 | |
| Formaldehyde solution 4%, buffered, pH 6.9 | Millipore Sigma | 1004960700 | |
| Glycerol | Sigma-Aldrich | 56-81-5 | |
| ImageJ | Fiji | N/A | |
| IntestiCult Organoid Growth Medium (Human) | STEMCELL Technologies | 06010 | |
| Leica SP8 Confocal Microscope | Leica Biosystems | ||
| Lipopolysaccharides from Escherichia coli O111:B4, purified by gel filtration chromatography | Millipore Sigma | L3012-10MG | |
| Microscope Slides | Fisher Scientific | 12-544-7 | |
| Normal Donkey Serum | Sigma-Aldrich | 566460 | |
| Nunc MicroWell 96-Well, Nunclon Delta-Treated, Flat-Bottom Microplate | Thermo Scientific | 136101 | |
| PBS (Phosphate Buffered Saline), 1x [−] calcium, magnesium, pH 7.4 | Corning | 21-040-CM | |
| Prolong Glass Antifade Mountant with NucBlue | Fisher Scientific | P36983 | |
| Recombinant Anti-Villin antibody [SP145] | Abcam | ab130751 | |
| Recombinant Human TNF-α protein 100 μg | Bio-Techne | 210-TA-100/CF | |
| SpectraMax iD3 Multi-Mode Microplate Reader | Molecular Devices | ||
| Thermo Forma Series II Water-Jacketed Tri-Gas Incubator, 184L | Fisher Scientific | 3140 | |
| TO-PRO™−3 Iodide (642/661) | Thermo Scientific | T3605 | |
| Triton X-100 | Sigma-Aldrich | 9002-93-1 | |
| Tubes, 0.5 mL, flat cap | Thermo Scientific | AB0350 | |
| Tween-20 | Sigma-Aldrich | 9005-64-5 |