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. 2022 Oct 18;11:e76630. doi: 10.7554/eLife.76630

Table 4. Quantification of H-bond strengths from LR-HNCO nuclear magnetic resonance (NMR) experiments for all Kyrpides, Ouzounis, Woese (KOW) domains.

EcNusG-KOW MtNusG-KOW MjSpt5-KOW
H-bond # β-Sheet Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz) Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz) Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz)
1 β1-β2 131 148 0.69 0.0077 188 205 0.61 0.0098 92 109 0.70 0.013
2 β1-β2 148 132 0.72 0.0083 205 189 0.69 0.0094 109 93 0.79 0.0088
3 β1-β2 134 146 0.67 0.0081 191 203 0.56 0.011 95 107 0.77 0.012
4 β1-β2 146 134 0.62 0.0096 203 191 0.62 0.0094 107 95 0.67 0.0095
5 β1-β2 136 144 0.65 0.0073 193 201 0.65 0.0080 97 105 0.68 0.048
6 β1-β2 143 136 0.65 0.0088 200 193 0.76 0.013 104 97 0.82 0.012
7 β2-β3 147 161 0.37 0.0105 204 218 0.31 0.015 108 122 0.54 0.010
8 β2-β3 161 147 Peak overlap 218 204 0.69 0.011 122 108 0.65 0.010
9 β2-β3 149 159 0.67 0.012 206 216 0.53 0.013 110 120 0.57 0.030
10 β2-β3 159 150 0.50 0.0086 216 207 0.45 0.012 120 111 0.60 0.010
11 β2-β3 152 157 0.46 0.019 209 214 Peak overlap 113 118
12 β3-β4 158 173 0.78 0.0077 215 230 0.83 0.0088 119 134 No HNCO peak
13 β3-β4 173 158 0.64 0.010 230 215 0.62 0.011 134 119 0.62 0.010
14 β3-β4 160 171 0.73 0.0056 217 228 0.75 0.0089 121 132 0.88 0.012
15 β3-β4 171 161 Peak overlap 228 217 0.73 0.0062 132 121 0.47 0.014
16 β3-β4 162 169 0.51 0.0074 219 226 0.50 0.0090 123 130 No H-bond distance
17 β3-β4 169 162 0.60 0.0066 226 219 0.61 0.0091 No equivalent
18 β3-β4 167 164 224 221 0.20 0.019 No equivalent
19 β5-β1 137 177 0.46 0.017 194 234 0.52 0.025 98 138 No HNCO peak
20 β5-β1 179 135 Peak overlap 236 192 0.47 0.016 140 96 Peak overlap
21 β5-β1 135 179 0.73 0.0060 192 236 Peak overlap 96 140 Peak overlap
22 β5-β1 181 133 238 190 142 94 0.46 0.023
23 β5-β1 No equivalent No equivalent 143 94 0.27 0.022
24 β5-β1 No equivalent No equivalent 94 143 0.57 0.010
hSpt5-KOW5 EcRfaH-KOW VcRfaH-KOW
H-bond # β-Sheet Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz) Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz) Donor Acceptor |h3JNC’| (Hz) σ |h3JNC’| (Hz)
1 β1-β2 707 724 0.60 0.0074 113 130 0.76 0.020 116 133 0.87 0.015
2 β1-β2 724 708 Peak overlap 130 114 0.53 0.051 133 117 0.59 0.024
3 β1-β2 710 722 0.70 0.0077 116 128 0.65 0.027 119 131 Peak overlap
4 β1-β2 722 710 0.50 0.019 128 116 Peak overlap 131 119 0.46 0.020
5 β1-β2 712 720 No HNCO peak 118 126 0.53 0.056 121 129 0.57 0.014
6 β1-β2 719 713 Peak overlap 125 118 0.66 0.026 128 121 0.62 0.017
7 β2-β3 723 735 H-bond peak present. but too weak to quantify 129 142 0.41 0.029 132 145 0.42 0.019
8 β2-β3 735 723 Peak overlap 142 129 0.70 0.019 145 132 0.69 0.027
9 β2-β3 725 734 0.71 0.010 131 140 0.48 0.032 134 143 0.61 0.036
10 β2-β3 733 726 140 132 0.96 0.021 143 135 1.0 0.011
11 β2-β3 728 731 0.61 0.012 134 138 137 141
12 β3-β4 732 745 0.59 0.009 139 154 0.60 0.034 142 157 Peak overlap
13 β3-β4 745 732 0.62 0.019 154 139 No HNCO peak 157 142 0.68 0.015
14 β3-β4 734 743 0.69 0.039 141 152 0.65 0.049 144 155 0.58 0.019
15 β3-β4 743 734 0.49 0.029 152 141 155 144 0.72 0.021
16 β3-β4 736 741 0.63 0.033 143 150 0.75 0.033 146 153 0.49 0.024
17 β3-β4 741 736 No H-bond orientation 150 143 0.47 0.052 153 146 0.48 0.015
18 β3-β4 No equivalent 148 145 No H-bond orientation 151 148 No HNCO peak
19 β5-β1 713 749 No HNCO peak 119 158 Peak overlap 122 161
20 β5-β1 751 711 160 117 0.51 0.036 163 120 0.57 0.037
21 β5-β1 711 751 0.68 0.023 117 160 0.68 0.015 120 163 0.53 0.016
22 β5-β1 753 709 162 115 165 118
23 β5-β1 No equivalent No equivalent No equivalent
24 β5-β1 No equivalent No equivalent No equivalent