Table 1.
Oligonucleotide primers are used in this study.
| Primer | Oligonucleotide sequence (5′–3′) | Specificity | PCR product size (bp) | References |
|---|---|---|---|---|
|
uidA F uidA R |
ATGCCAGTCCAGCGTTTTTGC AAAGTGTGGGTCAATAATCAGGAAGTG |
uidA | 102 | Abid and Al-Zuwainy [7] |
|
cnf1 F cnf1 R |
GGGGGAAAGTACAGAAGAATTA TTGCCGTCCACTCTCACCAGT |
cnf1 | 1111 | Dubois et al., [8] |
|
cnf2 F cnf2 R |
TATCATACGGCAGGAGGAAGCACC GTCACAATAGACAATAATTTTCCG |
cnf2 | 1240 | |
|
cnf3 F cnf3 R |
TAACGTAATTAGCAAAGA GTCTTCATTACTTACAGT |
cnf3 | 757 | |
|
cdt1 F cdt1 R |
CAATAGTCGCCCACAGGA ATAATCAAGAACACCACCAC |
cdt1 | 411 | Toth et al., [9] |
|
cdt2 F cdt2 R |
GAAAGTAAATGGAATATAAATGTCCG TTTGTGTTGCCGCCGCTGGTGAAA |
cdt2 | 556 | |
|
cdt3 F cdt3 R |
GAAAGTAAATGGAATATAAATGTCCG TTTGTGTCGGTGCAGCAGGGAAAA |
cdt3 | 555 | |
|
cdt4 F cdt4 R |
CCTGATGGTTCAGGAGGCTGGTTC TTGCTCCAGAATCTATACCT |
cdt4 | 350 | |
|
chuA F chuA R |
GACGAACCA ACGGTCAGGAT TGCCGCCAGTACC AAAGACA |
chuA | 279 | Clermont et al., [10] |
|
yjaA F yjaA R |
TGAAGTGTCAGGAGACGCTG ATGGAGAATGCGTTCCTCAAC |
yjaA | 211 | |
|
TspE4C2 F TspE4C2 R |
GAGTAATGTCGGGGCATTCA CGCGCCAACAAAGTATTACG |
TspE4C2 | 152 |