Table 1.
Parental PDX |
ID * | Therapy ** | Genes Mutated | TMB Gain *** | MSH6 † | MSH2 † | MLH1 † | PMS2 † |
---|---|---|---|---|---|---|---|---|
GBM6 | m4052 | RT | 20 | 2.10 | 0 | 0 | 0 | 0 |
m4063 | 44 | 2.78 | 0 | 0 | 0 | 0 | ||
m4066 | 21 | 1.24 | 0 | 0 | 0 | 0 | ||
GBM12 | m6159 | 219 | 15.12 | 0 | 0 | 0 | 0 | |
m6161 | 205 | 15.63 | 0 | 0 | 0 | 0 | ||
GBM43 | m3087 | 48 | 4.02 | 0 | 0 | 0 | 0 | |
m3098 | 27 | 1.30 | 0 | 0 | 0 | 0 | ||
GBM6 | m4056 | TMZ ×1 | 297 | 13.60 | 0 | 0 | 0 | 0 |
m4057 | 249 | 9.80 | 0 | 0 | 0 | 0 | ||
m4082 | 122 | 5.98 | 0 | 0 | 0 | 0 | ||
m4883 | 280 | 17.59 | 0 | 0 | 0 | 0 | ||
GBM12 | m2656 | 288 | 12.38 | 0 | 0 | 0 | 0 | |
m2657 | 302 | 16.67 | 0 | 0 | 0 | 0 | ||
GBM6 | m3395 | RT+TMZ ×1 | 78 | 3.69 | 2 | 0 | 0 | 0 |
m4051 | 473 | 20.62 | 1 | 0 | 0 | 0 | ||
GBM12 | m2671 | 463 | 22.36 | 2 | 0 | 0 | 0 | |
m2685 | 359 | 15.28 | 0 | 0 | 0 | 0 | ||
m2511 | RT+TMZ ×2 | 282 | 17.86 | 0 | 0 | 1 | 0 | |
GBM6 | m3378 | RT+TMZ ×3 | 1403 | 65.98 | 1 | 0 | 0 | 1 |
GBM12 | m4829 | TMZ ×4 | 2238 | 105.78 | 2 | 1 | 0 | 0 |
m4834 | 3021 | 151.85 | 3 | 1 | 0 | 1 |
* Identification number of individual derivative PDX. ** Therapy regimen for initial intracranial engraftment of PDX (see Figure 1A). *** Increase in tumor mutation burden (TMB), relative to matched parental PDX, measured in mutations per megabase (Mb) of DNA. † Number of mutations in each DNA mismatch repair (MMR) gene in each derivative PDX. RT = radiation therapy, TMZ = temozolomide cycle.