Table 3.
Effect of the genotypes on growth traits.
| Trait a | SNP b | SSC c | Position (bp) d | Genotype e | N f | Value g | Additive Effect |
Dominance Effect |
|---|---|---|---|---|---|---|---|---|
| ADG30–60 (g) | rs325760894 | 4 | 68428526 | GG | 34 | 536.39 ± 18.59 A | 75.63 | −4.36 |
| GT | 101 | 456.43 ± 10.79 B | ||||||
| TT | 57 | 385.13 ± 14.36 C | ||||||
| NN | 6 | |||||||
| rs81382100 | 4 | 68463657 | CC | 67 | 384.42 ± 13.24 C | 67.43 | 14.90 | |
| CT | 85 | 466.75 ± 11.76 B | ||||||
| TT | 42 | 519.28 ± 16.72 A | ||||||
| NN | 4 | |||||||
| rs320502793 | 4 | 68493463 | AA | 58 | 382.11 ± 14.14 C | 69.53 | 0.70 | |
| AG | 84 | 452.34 ± 11.75 B | ||||||
| GG | 52 | 521.17 ± 14.93 A | ||||||
| NN | 4 | |||||||
| ADG60–100 (g) | 14 | 131969638 | CC | 146 | 545.88 ± 9.88 cB | 88.24 | −21.13 | |
| CT | 19 | 637.99 ± 27.40 bA | ||||||
| TT | 4 | 772.36 ± 59.71 aA | ||||||
| NN | 29 | |||||||
| BAH (cm) | 14 | 42805887 | CC | 138 | 71.44 ± 0.33 A | 2.88 | 0.67 | |
| CT | 35 | 69.23 ± 0.65 B | ||||||
| TT | 13 | 65.69 ± 1.07 C | ||||||
| NN | 37 | |||||||
| 14 | 42805901 | AA | 153 | 71.16 ± 0.32 aA | 3.37 | 1.38 | ||
| AT | 24 | 69.17 ± 0.81 bA | ||||||
| TT | 7 | 64.43 ± 1.50 cB | ||||||
| NN | 39 | |||||||
| CD (cm) | rs705385434 | 2 | 78815567 | GG | 180 | 36.06 ± 0.18 A | 3.47 | −1.24 |
| GT | 21 | 38.29 ± 0.53 B | ||||||
| TT | 3 | 43.00 ± 1.40 C | ||||||
| NN | 19 |
a ADG30–60: Average daily gain from 30 to 60 kg, ADG60–100: Average daily gain from 60 to 100 kg, BAH: Back height, CD: Chest depth; b SNP: rs ID from Ensembl; c SSC: Sscrofa chromosome; d Positions of the significant SNP according to the Sscrofa Build 11.1 assembly; e NN represents no genotype; f N: Number of pig accessions; g Different capital letters indicate an extremely significant difference (p < 0.01), and different lowercase letters indicate a significant difference (p < 0.05).