Table 1.
Category of Genes | Group of Gene | Name of Gene |
---|---|---|
Self-replication | Ribosomal RNA genes | rrn4.5 ×2, rrn5 ×2, rrn16 ×2, rrn23 ×2 |
Transfer RNA genes | trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnH-GUG, trnK-UUU *, trnL-UAA *, trnL-UAG, trnM, trnM-CAU ×2, trnP-UGG, trnQ-UUG, trnR-UCU, trnS-CGA, trnS-GCU, trnS-GGA, trnS-UGA, trnT-UGU, trnT-GGU, trnV-UAC *, trnY-GUA, trnW-CCA, trnfM-CAU, trnA-UGC *,×2, trnI-GAU *,×2, trnL-CAA ×2, trnN-GUU ×2, trnR-ACG ×2, trnV-GAC ×2 | |
Ribosomal protein (small subunit) | rps2, rps3, rps4, rps7×2, rps8, rps11, rps12 **,×2, rps14, rps15, rps16 *, rps18, rps19 | |
Ribosomal protein (large subunit) | rpl2 *,×2, rpl14, rpl16 *, rpl20, rpl22, rpl23 ×2, rpl32, rpl33, rpl36 | |
RNA polymerase | rpoA, rpoB, rpoC1 *, rpoC2 | |
Translational initiation factor | infA | |
Genes for photosynthesis | Subunits of photosystem I | psaA, psaB, psaC, psaI, psaJ, ycf3 **, ycf4 |
Subunits of photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
Subunits of cytochrome | petA, petB *, petD *, petG, petL, petN | |
Subunits of ATP synthase | atpA, atpB, atpE, atpF *, atpH, atpI | |
Large subunit of Rubisco | rbcL | |
Subunits of NADH dehydrogenase | ndhA *, ndhB *,×2, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK | |
Other genes | Maturase | matK |
Envelope membrane protein | cemA | |
Subunit of acetyl-CoA | accD | |
Synthesis gene | ccsA | |
ATP-dependent protease | clpP ** | |
Component of TIC complex | ycf1 ×2 | |
Genes of unknown function | Conserved open reading frames | ycf2 ×2 |
Note: ×2: Two gene copies in IR regions; *: With one intron; **: With two introns.