Table 1.
Classification | Subtypes | Prognosis | Associated Genes | Ref. |
---|---|---|---|---|
Intrinsic subtypes | G- INT | Better overall survival | FUT, LGALS4, CDH17 | [20] |
G-DIF | Poor | AURKB, ELOVL5 | ||
Lei subtypes | Proliferative | Short disease-free survival | TP53 | [22] |
Metabolic | TP53 | |||
Mesenchymal | TP53 | |||
TCGA | EBV- positive | Best | PIK3CA, JAK2, PD-L1/2, BCOR | [23] |
MSI | Moderate with no adjuvant chemotherapy response |
PIK3CA, ERBB2/3, EGFR, PD-L1, MLH1, TP53 | ||
GS | Worse | CDH1, RHOA | ||
CIN | Moderate | SMAD4, APC, TP53 | ||
ACGA | MSI- high | Best with lowest recurrence frequency |
ARID1A, MTOR,
KRAS, PIK3CA, ALK, PTEN |
[24] |
MSS/EMT | Worse with highest recurrence frequency | CDH1 | ||
MSS/TP53+ | Moderate | APC, ARID1A, KRAS, PIK3CA, SMAD4 | ||
MSS/TP53- | Moderate | ERBB2, EGFR, CCNE1, CCND1, MDM2, ROBO2, GATA6, MYC | ||
Combined TCGA and ACRG | EBV- positive | Best | PIK3CA, JAK2, PD-L1/2, BCOR | [25,26] |
MSI- high | Best with lowest recurrence frequency |
ARID1A, MTOR,
KRAS, PIK3CA, ALK, PTEN |
||
GC with aberrant E-cadherin | * | * | ||
GC with aberrant p53 expression | * | * | ||
GC with normal p53 expression | * | * | ||
CIMP | CIMP-H | * | EBV-associated | [27,28,29,30,31] |
CIMP-L | * | * | ||
CIMP-N | Worse survival | * |
Abbreviations: genomic instability (G-INT), genomic diffuse (G-DIF), chromosomal instability (CIN), genomic stable (GS), microsatellite instability (MSI) and Epstein- Barr virus (EBV), microsatellite stable/epithelial-mesenchymal transition (MSS/EMT), CpG island methylator phenotype-High/Low/Negative (CIMP-H/L/N), not clearly established (*), increased () and decreased () mutations.