Table 1.
List of mutation differences in HA gene between Southern Hemisphere vaccine strains and Myanmar 2015–2019 viruses.
Representative Strain | Clade | Amino Acid Mutations in Each Nucleotide Position | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2015 | 19 | 21 | 69 | 130 | 140 | 144 | 154 | 158 | 160 | 175 | 176 | 185 | 241 | 280 | 327 | 342 | 395 | 466 | 495 | 505 | |
A/Switzerland/9715293/2013 a | 3C.3a | L | G | D | S | S | A | S | G | N | S | K | P | N | K | Q | R | G | K | G | D |
2015 Myanmar viruses | 3C.2a | I | R | N | T | R | T | A | R | S | Y | T | S | D | R | H | K | R | R | R | N |
2016 | 49 | 112 | 137 | 158 | 160 | 174 | 176 | 187 | 210 | 258 | 422 | 500 | |||||||||
A/Hong Kong/4801/2014 b | 3C.2a | R | S | N | R | S | N | K | N | P | I | I | G | ||||||||
2016 Myanmar viruses | 3C.2a and 3C.2a1 | Q | N | K | G | G | H | T | K | L | M | V | E | ||||||||
2017 | 78 | 94 | 108 | 112 | 137 | 151 | 158 | 176 | 187 | 210 | 287 | 305 | 327 | 372 | 422 | 500 | |||||
A/Hong Kong/4801/2014 b | 3C.2a | E | G | K | S | N | T | R | K | N | P | D | P | H | Q | I | G | ||||
2017 Myanmar viruses | 3C.2a1b | G | D | R | N | K | K | G | T | K | L | N | S | Q | L | V | E | ||||
2018 | 64 | 78 | 108 | 140 | 144 | 151 | 160 | 174 | 176 | 187 | 213 | 223 | 235 | 277 | 325 | 327 | 363 | 422 | 495 | 546 | |
A/Singapore/INFIMH-16-0019/2016 c | 3C.2a1 | I | E | K | S | T | T | S | N | T | K | Q | K | S | R | V | H | V | V | E | A |
2018 Myanmar viruses | 3C.2a and 3C.2a1b | R | G | R | R | A | K | K | H | R | N | R | R | F | Q | I | Q | M | I | G | V |
2019 | 16 | 49 | 78 | 99 | 108 | 110 | 112 | 137 | 144 | 147 | 151 | 153 | 154 | 158 | 187 | 205 | 209 | 277 | 327 | 363 | |
A/Switzerland/8060/2017 d | 3C.2a2 | A | R | E | K | K | Y | S | N | T | K | T | S | A | K | N | K | F | Q | H | V |
2019 Myanmar viruses | 3C.2a1b | T | Q | G | E | R | N | N | K | A | T | K | F | S | G | K | R | S | R | Q | M |
422 | 500 | 517 | 538 | 545 | 546 | ||||||||||||||||
I | G | Q | I | V | A | ||||||||||||||||
V | E | R | M | I | V |
a Vaccine strain for 2015, b vaccine strain for 2016 and 2017, c vaccine strain for 2018, and d vaccine strain for 2019. Amino acid substitutions in bold represent common mutations for all isolates in each season, whereas those in normal font represent additional sporadic mutations observed in some of the relevant season strains.