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. 2022 Nov 14;11:e81432. doi: 10.7554/eLife.81432

Table 4. Restraints used during energy minimization (EM) and stepwise equilibration (steps 1–6) of the asymmetric plasma membrane mimetic in kJ mol-1nm-2.

Step Time [ns] Timestep [fs] Ensemble Lipids Dihedrals
EM 1000 1000
1 0.125 1 NVT 1000 1000
2 0.125 1 NVT 400 400
3 0.125 1 NPT 400 200
4 0.5 2 NPT 200 200
5 0.5 2 NPT 40 100
6 0.5 2 NPT 0 0