Table 1.
Top 20 KEGG enrichment analysis of DEGs in JXZ-T vs. JXZ-C and MXXZ-T vs. MXXZ-C
| Pathway term | Term ID | Gene number | ||
|---|---|---|---|---|
| Up | Down | Total | ||
| JXZ-T vs. JXZ-C | ||||
| Plant hormone signal transduction | ko 04,075 | 143 | 24 | 167 |
| Phenylpropanoid biosynthesis | ko 00,940 | 120 | 6 | 126 |
| Carbon metabolism | ko 01,200 | 101 | 18 | 119 |
| Starch and sucrose metabolism | ko 00,500 | 92 | 11 | 103 |
| Amino sugar and nucleotide sugar metabolism | ko 00,520 | 67 | 8 | 75 |
| Glycolysis / gluconeogenesis | ko 00,010 | 62 | 10 | 72 |
| Glutathione metabolism | ko 00,480 | 39 | 9 | 48 |
| Galactose metabolism | ko 00,052 | 37 | 10 | 47 |
| Carbon fixation in photosynthetic organisms | ko 00,710 | 36 | 6 | 42 |
| Other glycan degradation | ko 00,511 | 33 | 2 | 35 |
| Phagosome | ko 04,145 | 32 | 1 | 33 |
| Fructose and mannose metabolism | ko 00,051 | 26 | 4 | 30 |
| Cutin, suberine and wax biosynthesis | ko 00,073 | 26 | 3 | 29 |
| DNA replication | ko 03,030 | 22 | 7 | 29 |
| Fatty acid elongation | ko 00,062 | 25 | 2 | 27 |
| Alanine, aspartate and glutamate metabolism | ko 00,250 | 22 | 5 | 27 |
| Pentose phosphate pathway | ko 00,030 | 19 | 6 | 25 |
| Glycosaminoglycan degradation | ko 00,531 | 15 | 1 | 16 |
| Thiamine metabolism | ko 00,730 | 8 | 5 | 13 |
| Mannose type O-glycan biosynthesis | ko 00,515 | 11 | 0 | 11 |
| MXXZ-T vs. MXXZ-C | ||||
| Plant hormone signal transduction | ko 04,075 | 78 | 36 | 114 |
| Carbon metabolism | ko 01,200 | 60 | 38 | 98 |
| MAPK signaling pathway—plant | ko 04,016 | 47 | 39 | 86 |
| Starch and sucrose metabolism | ko 00,500 | 55 | 26 | 81 |
| Biosynthesis of amino acids | ko 01,230 | 49 | 28 | 77 |
| Glycolysis / Gluconeogenesis | ko 00,010 | 51 | 13 | 64 |
| Amino sugar and nucleotide sugar metabolism | ko 00,520 | 47 | 11 | 58 |
| Pyruvate metabolism | ko 00,620 | 25 | 11 | 36 |
| Carbon fixation in photosynthetic organisms | ko 00,710 | 20 | 13 | 33 |
| Glyoxylate and dicarboxylate metabolism | ko 00,630 | 12 | 15 | 27 |
| Fructose and mannose metabolism | ko 00,051 | 18 | 5 | 23 |
| Pentose phosphate pathway | ko 00,030 | 15 | 7 | 22 |
| Citrate cycle (TCA cycle) | ko 00,020 | 11 | 10 | 21 |
| Fatty acid elongation | ko 00,062 | 16 | 3 | 19 |
| Sphingolipid metabolism | ko 00,600 | 14 | 4 | 18 |
| Flavone and flavonol biosynthesis | ko 00,944 | 4 | 4 | 8 |
| Brassinosteroid biosynthesis | ko 00,905 | 7 | 1 | 8 |
| Photosynthesis—antenna proteins | ko 00,196 | 0 | 7 | 7 |
| Mannose type O-glycan biosynthesis | ko 00,515 | 6 | 0 | 6 |
| Isoflavonoid biosynthesis | ko 00,943 | 2 | 4 | 6 |
“JXZ-C”, “JXZ-T”, “MXXZ-C” and “MXXZ-T” indicate the control (C) and PHS-induced (T) samples of the JXZ and MXXZ varieties, respectively