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Pearson Correlation Coefficients for Pairwise Comparison of NGS Alignment Softwares
| Aligner Pairs | No Processing Window Correction |
8 bp Processing Window Correction |
|---|---|---|
| Geneious & CLC | 0.9981 | 0.9995 |
| Geneious & Bowtie2 | 0.9985 | 0.9999 |
| Geneious & BWA | 0.9986 | 1 |
| CLC & Bowtie2 | 0.9994 | 0.9996 |
| CLC & BWA | 0.9994 | 0.9995 |
| Bowtie2 & BWA | 0.9994 | 0.9999 |
After processing window adjustment, all aligners become more similar to each other. However, Geneious and BWA remain the most similar.
