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. 2022 Nov 28;12:20474. doi: 10.1038/s41598-022-24823-0

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Chromosomes of KK3 showing two tracks per chromosome with the bottom track representing ancestry of scaffolded contigs and the top track showing ancestry of aligned unplaced contigs. Each KK3 chromosome is represented by a horizontal bar with the length indicated on the x-axis. The ancestral origin of each scaffolded contig, based on sequence alignment results, is indicated by colored rectangles on the bottom of each chromosome. The ancestral origin of each unplaced contig, based on sequence alignment results, is indicated by colored rectangles on the top of each chromosome. The size of colored rectangles is proportionate to the relative size of the contig, but not proportionate to the actual bp size. Teal represents contigs that had more sequence overlap with S. officinarum (LA), green represents S. spontaneum (AP85), pink represents contigs that mapped almost equally to both ancestors, and purple represents contigs that mapped half to one ancestor and half to the other.