Table 2.
Correlation between the extent of atypical hepatocytes and ΔCt value of the 23 genes in frozen noncancerous liver tissues in Cohort 3. (n = 62).
| Gene | r | p |
|---|---|---|
| CDT1 | − 0.6784 | < 0.0001 |
| AGFG1 | − 0.2218 | 0.0832 |
| GBLN1 | − 0.1659 | 0.1974 |
| SLC30A6 | − 0.2640 | 0.0381 |
| GPC5 | − 0.2900 | 0.0222 |
| SYNPO | − 0.2867 | 0.0239 |
| OR56A5 | 0.0682 | 0.5983 |
| NLGN4X | − 0.2442 | 0.0558 |
| OR2AT4 | − 0.3500 | 0.7873 |
| DPPA5 | 0.0285 | 0.8257 |
| BEND4 | − 0.1950 | 0.1288 |
| ZNF98 | − 0.3586 | 0.0042 |
| OR5D13 | − 0.0459 | 0.7230 |
| OR7D4 | − 0.0037 | 0.9771 |
| APOPT1 | − 0.2963 | 0.0155 |
| CDY2B | 0.0762 | 0.5559 |
| PRL23P8 | − 0.0992 | 0.4432 |
| PIGZ | − 0.3259 | 0.0097 |
| SNHG3 | − 0.3338 | 0.0080 |
| BCAR4 | − 0.1490 | 0.2476 |
| CDRT15P2 | − 0.0754 | 0.5603 |
| LOC100133612 | − 0.2407 | 0.0595 |
| MBD3LA | − 0.0658 | 0.6114 |
ΔCt = Ct for each of interest − Ct β-actin Data were analyzed using the Spearman’s rank correlation test.
AGFG1, ArfGAP with FG repeats 1; APOPT1, cytochrome c oxidase assembly factor 8 (COA8); BCAR4, breast cancer anti-estrogen resistance 4; BEND4, BEN domain containing 4; CDRT15P2, CMT1A duplicated region transcript 15 pseudogene 2; CDT1, chromatin licensing and DNA replication factor 1; CDY2B, chromodomain Y-linked 2B; DPPA5, developmental pluripotency associated 5; FBLN1, fibulin 1; LOC100133612: LOC1134 (Gene ID: 100133612), long intergenic nonprotein coding RNA 1134; NLGN4X, neuroligin 4 X-linked; MBD3L1, methyl-CpG binding domain protein 3 like 1; OR2AT4, olfactory receptor family 2 subfamily AT member 4; OR56A5, olfactory receptor family 56 subfamily A member 5; OR5D13, olfactory receptor family 5 subfamily D member 13; OR7D4, olfactory receptor family 7 subfamily D member 4; PIGZ, phosphatidylinositol glycan anchor biosynthesis class Z; RPL23P8, ribosomal protein L23 pseudogene 8; SLC30A6, solute carrier family 30 member 6; GPC5, glypican 5;SNHG3, small nucleolar RNA host gene 3; SYNPO, synaptopodin; ZNF98, zinc finger protein 98.