Fig. 4.
Dietary intervention affected the gut microbiota colonized with P. copri RA. A Shannon diversity index between the FCD and NCD groups. (p value = 0.0198). B Principal coordinate analysis (PCoA) of the microbial composition based on Bray Curtis. (p value = 0.031, permutational multivariate analysis of variance (PERMANOVA) by Adonis). C Taxonomy stack distribution of phyla. D Relative abundance of Akkermansiaceae. E Relative abundance of Bacteroidaceae. F Mucus layer thickness of the colon. Each symbol in (F) represents an animal