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. 2022 Jun 13;113(6):615–623. doi: 10.1093/jhered/esac031

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© The American Genetic Association. 2022.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 1. — A bobcat reference genome assembly. (A) A bobcat, Lynx rufus (photograph credit: Laurel Serieys). (B) Representative habitats for bobcats (photograph credit: Barry Rowan). (C) Phylogenetic relationships in the Lynx genus. The IUCN Red List status (EN, Endangered; LC, Least Concern) and genome assembly availability (yes: available on NCBI, no: unavailable on NCBI) are denoted. Divergence time estimates are in units of million years ago (Mya, Johnson et al. 2006). (D) NGx plot comparing the 3 available Lynx genome assemblies. This plot shows the x fraction of genome assembly that is represented by scaffolds of at least y Mb. The N50 value is represented by the dashed vertical line. Our bobcat assembly (purple) has similar scaffold-level contiguity with the Canada lynx assembly (orange). The Iberian lynx assembly (green) has lower scaffold-level contiguity. The names for 5 longest Canada lynx chromosomes are annotated (See online version for color figure).