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. 2021 Sep 19;1(1):vbab020. doi: 10.1093/bioadv/vbab020

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© The Author(s) 2021. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 1. — Heatmaps of 16S rRNA V3V4 alleles in Pseudoalteromonas as generated by RibDif. V3V4 amplicons were generated from the 16S rRNA gene of Pseudoalteromonas and clustered at 100% identity. (A) Alleles are across columns and individual genomes on the rows. The count of members in a given cluster is given as color intensity. Rows and columns are additionally clustered by similarity in cluster abundance using Wards method. (B) Confusion matrix of each genome showing which will overlap in V3V4-based metataxonomy, clustered using Wards method. The figure is generated using ‘RibDif –g Pseudoalteromonas’. sp., genomes only classified as Pseudoalteromonas species.