Table 1.

Overview of modules provided by the cblaster command-line interface

Module	Description
search	The main cblaster search workflow
makedb	Create local search databases from personal
	sequence data
gne	Gene neighbourhood estimation of cblaster
	search results
extract	Extract sequences from cblaster search results
gui	Launcher for the cblaster GUI
extract_clusters	Extract detected gene clusters from cblaster
	sessions
plot_clusters	Plot detected gene clusters using clinker
	(Gilchrist and Chooi, 2021)